Gene Avin_02420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_02420 
Symbol 
ID7759203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp231731 
End bp232435 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content70% 
IMG OID643803167 
Productnickel incorporation protein 
Protein accessionYP_002797478 
Protein GI226942405 
COG category[K] Transcription
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.183496 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACTGA TCACCGTGGC CGGCTCGCCG TCGGTCGGCA AGACCTCGGT CATCCTCCAG 
GTCGCCAAGC TGCTCAGGGA GGAAGGCCTC GCCGTCGGCG TGGCCAAGTT CGACGCCCTG
TCCAGCGACG ACGGGCACCT CTACGCCAGG CACGGCATCC CGGTGGCGGT CGGCCTGGCC
GGCGCCCTGT GCCCGGACCA CTACTTCGTC TCCAATGTCA CCGACTGCCA GGCCTGGGGC
CGGCGCCAGG GCCTCGACGT GCTGATCGGC GAGAGCGCCG GACTGTGCAA CCGCTGCTCG
CCGCACATCG AAGGCGTGCT GGCGATCTGC GTGGTCGACG CCCTGGCCGG GGTGCACACG
CCGAAGAAGA TCGGCCCGAT GCTGCGCCTG GCCGACCTGG TGGCGATCAC CAAGGGCGAC
ATCATTTCCC AGGTCGAGCG CGAGGTGTTC GCCTTCCACG TGCGCCTGGC CAATCCCGGC
GCGCCGGCGC TGTTCTGCAA CGGTCTCACC GGCCAGGGCG CCGCCGATCT GGTTCGCCAC
ATCCGCGCCG CCGCACCGAC GCCGGATCTG GACGGCAGCC GCCTGCGCTT CTCGATGCCG
GCGGCGGTCT GCCCCTACTG CGTCGGCGAG ACCGCCATCG GCGAGACACA TCAGCGTGGC
AACGTGAAGA AGATGCGCTT CGCCGACCTG GAGGACTCCC GATGA
 
Protein sequence
MQLITVAGSP SVGKTSVILQ VAKLLREEGL AVGVAKFDAL SSDDGHLYAR HGIPVAVGLA 
GALCPDHYFV SNVTDCQAWG RRQGLDVLIG ESAGLCNRCS PHIEGVLAIC VVDALAGVHT
PKKIGPMLRL ADLVAITKGD IISQVEREVF AFHVRLANPG APALFCNGLT GQGAADLVRH
IRAAAPTPDL DGSRLRFSMP AAVCPYCVGE TAIGETHQRG NVKKMRFADL EDSR