| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9811 |
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| Symbol | avhB11 |
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| ID | 7379954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011986 |
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| Strand | - |
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| Start bp | 12516 |
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| End bp | 13538 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643648243 |
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| Product | type IV secretion protein AvhB11 |
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| Protein accession | YP_002546480 |
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| Protein GI | 222102339 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | [TIGR02788] P-type DNA transfer ATPase VirB11 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACGCTC CAGCAGGTAA CCCACTGGTT CATGATCCCC ACTATTTCCT GACCCGTTCG
TTGGAGCCCA TCAGGCCATT TCTTGATGAT CCAAAGGTTG TCGAAATCGC GATCAACAAG
CCGGGCCACG TTTACGTGGA ACGGTTTGGC GCGGACCATA TGGAGCATCA TCTTATCGAT
GTTCTGACCG CGCAAGAGAT AGAGAACATC GGAGAACGCG TCGCCGCCTC AACAAAGCAG
TTCTTGAACC AGGCCAATCC AATCCTAAGC GCGGCGCTGC CCACTGGTGA GCGCATTCAG
GTCGTTTTAC CGCCCGCGGC TCCTGACGGA GGATCCATTA CCATCCGAAA GCAGGTCGTC
CAGAATTTCT CTCTGGAAGA TTACAGGGAC AACGGATCGC TCGATAAGGT GTCGGTTGCC
GTTGGAGGGT TGAGCAATGT CGATCGCGAG CTCATCGGGT ATTTGCGCCA AGAAAAGATC
TACGACTTCA TCCATACTGC GATCACGAAG CGGGTTTCGA TCCTTATCAG CGGCGGCACG
TCCTCGGGCA AAACGACATT CTTAAATGCC TGCCTCAACT CAGTTGACCT GAACGAGCGC
ATCTTGACGC TCGAAGACAC GCGGGAACTT TTTCCGCCAC AGAAAAACGC AGTCCACTTG
GTTGCTTCCA AAGGTGGGCA AGGTACGTCC AATGTGACCA TTCAAAACCT GCTCGAGTCG
GCACTGCGCA TGCGTCCTGA CCGCCTTTTC GTGGGCGAGA TCAGAGGCGC TGAAGCTTTC
TCTTTCCTGC GCGCCATCAA CACCGGTCAT CCGGGTAGCA TGTCCACAGT TCATGCAGAC
ACCCCTATGG GGGCATATGA GCAACTTGCA ATGATGATGC AGCAATCCGG CATGTCGGCG
GGCTACTCGA AGCAGGACTT AATGTCCTAC ATTCAAATGG TGATTCCGAT CGTCATCCAG
CTCCGCCGCG AAGGAGGCAA GCGCGGCGTT TCGGAGATTT TCTTTGCAAG AGATGAAGCA
TGA
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| Protein sequence | MNAPAGNPLV HDPHYFLTRS LEPIRPFLDD PKVVEIAINK PGHVYVERFG ADHMEHHLID
VLTAQEIENI GERVAASTKQ FLNQANPILS AALPTGERIQ VVLPPAAPDG GSITIRKQVV
QNFSLEDYRD NGSLDKVSVA VGGLSNVDRE LIGYLRQEKI YDFIHTAITK RVSILISGGT
SSGKTTFLNA CLNSVDLNER ILTLEDTREL FPPQKNAVHL VASKGGQGTS NVTIQNLLES
ALRMRPDRLF VGEIRGAEAF SFLRAINTGH PGSMSTVHAD TPMGAYEQLA MMMQQSGMSA
GYSKQDLMSY IQMVIPIVIQ LRREGGKRGV SEIFFARDEA
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