| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9590 |
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| Symbol | traD |
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| ID | 7381937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011991 |
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| Strand | - |
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| Start bp | 64625 |
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| End bp | 64903 |
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| Gene Length | 279 bp |
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| Protein Length | 92 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643653272 |
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| Product | conjugal transfer protein Dtr system |
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| Protein accession | YP_002551443 |
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| Protein GI | 222109178 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.285665 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGCAATCGG CCCGAAACGA AGATCGCAAA AAGGACACGC GCGAGAAGAT CCAGCTTGGC
GGTCTGGTGG TCAAAGCCGG ACTTCGGGAT ATCGACAAAG CCGTCTTGCT CGGTTGGCTG
ATGGAGCTCC CAAAGCGCCT GAGCGACGCC GAAGGGGAAT GGGCAAGGCT GCAAGCCATC
GGCAAAAGAG GGTTCGAGGA TGCTGCCCAA GAAGATGATG CTCGTGATCG TGCCGGCAGC
CCTGATGCTG GCACTTACAA TTGGAATGAA AGGGATTGA
|
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| Protein sequence | MQSARNEDRK KDTREKIQLG GLVVKAGLRD IDKAVLLGWL MELPKRLSDA EGEWARLQAI
GKRGFEDAAQ EDDARDRAGS PDAGTYNWNE RD
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