Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_9525 |
Symbol | |
ID | 7381895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011991 |
Strand | + |
Start bp | 20632 |
End bp | 22509 |
Gene Length | 1878 bp |
Protein Length | 625 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643653231 |
Product | hypothetical protein |
Protein accession | YP_002551402 |
Protein GI | 222109137 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.771894 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCATGA ATTCGCGGAA AAGCTCAACG CTGGGGAACC TGGACATGTC CAACGGTGAT CGTTTCGCCA TAATTTCCGT AGGTGGGAAG GGTTACGATG TTCTTCTCAA AGAGTTGAGT TCCGCTGCAC CAGGCCTCCT TTTTGGCAGT GCGGCTTCGA TTTTCGAACC AACGCTCTTG CAAGGCGGAC GCCCTACATC CCAAGCTGTC GCCCGCGCTC TTTGCGAGGC AGCGGGTGTC GATGCAACAG CGTTCGCGTC GGCCATCGAG GGCGCTGCTT ACGAAGCACT ACTGCAGGAA CATCCCGTTC GATCGAGATT ATCACGAGTT TTTTCAAACT ACTTTCTACG CTTTGGCGCT GCTCAAGGTC AGGAGACTGT CAGGTTCAAT AAATGCCATC AAGCGATAGC CCATCTGCTG TCGCAAGGAC GACTGTCGGG CGCTGTCACA ACCAATTATG ATACCTGCCT GGAGCAGGCA TATGAGGATC TGCGGGCTAC AAATTCTCTC AACACAATAG TCCAGCGGAA CGATGCTGCG AAGAAGGTAG CCTTGGCTGA GGAACCGGCT CCGGCACCGA CCCTTTTCAA ATTACACGGT TGTGCGCGGC ACCCAAAAAG CATGATCTTT TCTCTGGAAC AGGAAAAGGA GATGCCCGCC TGGAAAAAAC AGACGATGGG ATCCTTGTTG GGTAAGACTG TACTGGTGCT CGGATACTCA GGTCTGGATT TTGAAGTTTG TCCAGAGTTG TATGATCTGA ACATCGATAA CCTGTACTGG ATGGCCTGGG GAAAAAATGG CGTCCCGGAT CTTACGTCGA ATGCCATAAA GGTTCTGAAC AAGGAAAGAC GCCGATCAAC GGTCATTTGC GGGGATCTCT GCGTGTTCCT GTCGGACATG ACGCCGCTTC TTTCTCAGGA TCTGCCAGAG GTCAAAAACC CCGTGGTGCC GACTTTGTTG TCAGACAAAC TCCTCGACGC GCTCGACCAA AGCGGCCGAC GATTGTGGGC GGCCCGCGCG TTCGTCATGT TGAGCATTCC GGCGGCAGCA ACTTCAGCTC TTCGTTTGGA GCGGGCTGGA TCGGAAGACC AAATTCTGTC GCGTGATTTC GAACTTGTCC GCTTGGGCGC GCTCAATCAC AGTATGAGAT ACTATGATAA CGCGGATGCC AACAAAGAGC TGTCAGACGA TGCGTCTTTG CCGTTGAGGG ATCGAATTGG TCATGCAATA GGCGAGTCCG GCGCCTGTTC CATGGCCGGC GACGAAAAGC GATCCCGCGA GGCTCTCACC CGCGCGCGCG ATCTGACGCA CAATCTGACT AATCCATTAC ACCGCAAGCG CCTTCTGATC AAAACCGAAT GGATGGACCT GTTGCTACAA ACGGCCGAAC GCGATCTCAA GGATTCGAAA TTGAAGGAAA ACCTGATAGT CCGCTTCCGC GCATTACAGC GCAGAGCATA CAAAACAGGC GAACACATCC TTGTCGACCT CTGTGAGCAG GAAGTGGCAC AACTGTCCGA CGTCAGCGTC GCTGCTATAC ATTCTGGAAA GGAGCGACCG TCCGGTGACA TATTTGAGCA AATAGGGAAC TACGTCGGTC AAGTGACGGC TTTGGACACA CGGACGCAGC AGACCGGATC AACCGAGCTG GCAAGCCAAC TTAGAAAGCG GCTTGAAAAA ATGCCTCTGT ACGGGCTTCC GACTTGGCGG GTGTACAGGA CACTGATCGA TTTCGCGGCT ACGCTCGATG AAAGAGAGAA CTTGTACCGG TTGTTCGAAG AGTCGATTGC CAACTGCCAA TTTCATCCCG ACTACGTTCT GCGCGTACAA GAATCCACTC GACAAAAAGT TATAACGCCG CTTTGGTCAG TGACGTAA
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Protein sequence | MTMNSRKSST LGNLDMSNGD RFAIISVGGK GYDVLLKELS SAAPGLLFGS AASIFEPTLL QGGRPTSQAV ARALCEAAGV DATAFASAIE GAAYEALLQE HPVRSRLSRV FSNYFLRFGA AQGQETVRFN KCHQAIAHLL SQGRLSGAVT TNYDTCLEQA YEDLRATNSL NTIVQRNDAA KKVALAEEPA PAPTLFKLHG CARHPKSMIF SLEQEKEMPA WKKQTMGSLL GKTVLVLGYS GLDFEVCPEL YDLNIDNLYW MAWGKNGVPD LTSNAIKVLN KERRRSTVIC GDLCVFLSDM TPLLSQDLPE VKNPVVPTLL SDKLLDALDQ SGRRLWAARA FVMLSIPAAA TSALRLERAG SEDQILSRDF ELVRLGALNH SMRYYDNADA NKELSDDASL PLRDRIGHAI GESGACSMAG DEKRSREALT RARDLTHNLT NPLHRKRLLI KTEWMDLLLQ TAERDLKDSK LKENLIVRFR ALQRRAYKTG EHILVDLCEQ EVAQLSDVSV AAIHSGKERP SGDIFEQIGN YVGQVTALDT RTQQTGSTEL ASQLRKRLEK MPLYGLPTWR VYRTLIDFAA TLDERENLYR LFEESIANCQ FHPDYVLRVQ ESTRQKVITP LWSVT
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