| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9253 |
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| Symbol | |
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| ID | 7367853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011984 |
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| Strand | - |
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| Start bp | 198594 |
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| End bp | 199517 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643644416 |
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| Product | transcriptional regulator LysR family |
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| Protein accession | YP_002542713 |
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| Protein GI | 222083310 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.321574 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACAGC GAAAACGCCG CCTTCCACCG CTGAAGTCAT TGCTGTTCTT GGAAAGCGTG
GTCAGGAACC AAAGCGTAAC GGCTGCAGCG GATGAGCTGT CGATCACCCA TAGCGCGGTC
AGCAAGCAGC TGTCACAGCT GGAAGTATGG ATCGGGCAGC CGCTCTTTCT TGAGAAGCGC
AAAGGAATGA TTCCGACAGC AGAGATCGGG CGTGTAGCGG CTGTGTTGGG CAACGCATTC
GATGAAATAC AGGACGCACT TGATGAGCTA CATCCCAAAC GGGCCGCAAA GCCGCCGGTA
CTTCGCGTCA TTGCTCCCGC GACCTTGGCA ATGCGTTGGC TGATACCGAA GCTTGGCGAG
TTTCACACAT CCGCAGGTGA GACGGACGTG ATGGTGCGGC CCACGCATAC GCCCGACAAT
TGGCTCGAGA TGGAATTCGA CATCGCGATC CGGAGGGGCG GCTTGATACC ACCGCAATTT
CTGCCCCAGT CGCTTTTTGC CGAGACACTG TCACTGGTGG CTACGGCGCG GGTCGCTGAG
AGCTATCGCA TGGGGCAGGG AGATCAACTG TCTCAGATTG GCTTGATCGA TGTATCAACG
CGTCATGGTG AACTAATGAA CTGGCTGAAG CTGGCTGGTC TGCCGGTGGC AATGGCGCGT
CAGGCAACCA AGTTGCCGCA TTTCTATATC GCCCTGGACG CCATGTTCGC GGGCCGCGGC
GCCTTGGTGG TTCCGACCTA CCTGATCGAG GATCAGCTGT CACGCGGCGA GCTCGTGGAG
CTGTTTCCTC AATCGCGGAT CCAAGGCCCG AGCTACCAGG TTTTCGTCAA TCCCGCGTCC
GGCGCGGGAA ATTTAGCCAA GGGGTTTGTG GACTGGATTA AGCGCGCTAT CCCTTCGGTG
GCTCAATATG CCGAAACGAG ATAA
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| Protein sequence | MEQRKRRLPP LKSLLFLESV VRNQSVTAAA DELSITHSAV SKQLSQLEVW IGQPLFLEKR
KGMIPTAEIG RVAAVLGNAF DEIQDALDEL HPKRAAKPPV LRVIAPATLA MRWLIPKLGE
FHTSAGETDV MVRPTHTPDN WLEMEFDIAI RRGGLIPPQF LPQSLFAETL SLVATARVAE
SYRMGQGDQL SQIGLIDVST RHGELMNWLK LAGLPVAMAR QATKLPHFYI ALDAMFAGRG
ALVVPTYLIE DQLSRGELVE LFPQSRIQGP SYQVFVNPAS GAGNLAKGFV DWIKRAIPSV
AQYAETR
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