| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9208 |
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| Symbol | |
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| ID | 7367742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011984 |
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| Strand | - |
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| Start bp | 161997 |
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| End bp | 162929 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643644387 |
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| Product | nucleoside-diphosphate-sugar epimerase |
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| Protein accession | YP_002542684 |
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| Protein GI | 222083281 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.76914 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTGGCTCAGC ACGTATTCAT CATCGGCGCG ACGGGATTTG TCGGTGGGGC AGTAGCCCGC
CACTTTGTTT CGCGCCGTTT CCGGGTCACG GGTTTGGCCC GCAGCGGCGA GGCTGCAGGA
CGTCTGCGGG CCGCCGGCAT GACGGTGCAA ATCGGCGACT TGGCCGAGCG CCTGCTGACA
GTGACCGAAT TTGCTAGGAA CGCCGATGTC GTCATGTTTG CGGCACAGGT CCCGCCTCAT
GTCGAGCTTG ACGCTGTCAA GGCGCTATTG GACGCGCTCG ATGGCAGCGG CAAAACGTTC
GTTTTCCTGT CCGGCTCCGG TGTGCTGTGT CAGCGCACGC AAGGGGCATG GAGCGCCGAA
AGCTTTGGCG AAGACGACCC GTTCGAACCC GAACCTTTAG CCGTCGCCCG CGTCGAGGCA
GAGACGCTGG TCCGCGCCAC TTCTTCACGC GGCATTCGTG GCATCGTCAT GCGTCCGCCG
CTCATCTGGG GACCGGAAGA TCATGGCCAT GTGTCGATGG TCTATCGCTC GGTCGCCGCC
ACAGGTGCTG CCTGCTACAT CGGCGACGGC CTCGCCGCCT ATTCGAATGT CCATGTCGAC
GATATCGCAC GGCTGTTCGA ACTCGCCGTC ACCAAGGGTG AAGGTGGTGC CGTCTATCAC
GCCGCTGCCG GCGAAATCCC CAATCGCTGG ATCGCAGAAG CAGTTGCCCG CGACCTCGGC
TGCGAGACCC GCAATGTTTC GATGTCCGAG GCCGCCGACA TCTGGGGCGA ATTTGGCGCG
CTGATCATGA GTGTATCGAG CCGGGTACGG GATGCGCAAA CGCGCAAATC GCTCGGCTGG
TCGCCGCGCC ACACGGACAT GTTGTCCGAA ATCGGTGAGC CGCGCCTGCG CACGCTTGCC
ACATCATCAA CCTTGGAAGG AACACAACAA TGA
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| Protein sequence | MAQHVFIIGA TGFVGGAVAR HFVSRRFRVT GLARSGEAAG RLRAAGMTVQ IGDLAERLLT
VTEFARNADV VMFAAQVPPH VELDAVKALL DALDGSGKTF VFLSGSGVLC QRTQGAWSAE
SFGEDDPFEP EPLAVARVEA ETLVRATSSR GIRGIVMRPP LIWGPEDHGH VSMVYRSVAA
TGAACYIGDG LAAYSNVHVD DIARLFELAV TKGEGGAVYH AAAGEIPNRW IAEAVARDLG
CETRNVSMSE AADIWGEFGA LIMSVSSRVR DAQTRKSLGW SPRHTDMLSE IGEPRLRTLA
TSSTLEGTQQ
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