| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9122 |
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| Symbol | |
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| ID | 7367676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011984 |
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| Strand | + |
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| Start bp | 86920 |
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| End bp | 87834 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643644323 |
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| Product | transcriptional regulator LysR family |
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| Protein accession | YP_002542620 |
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| Protein GI | 222083217 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.272259 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCTTG AGCAGCTAAG GTGTTTCGTT GTTGTTGCCG ACGAATTGCA CTTCGGGAGA
GCGGCCCAAA AAGCCGGGAT TTTACCTGCG TCTCTCGGTC GTCATGTCCG TCTCCTTGAA
GAGTCGCTCG GGACGCAGCT GTTCGTGCGG ACGACGCGCA GCGTTAATCT CACGCAGGAT
GGTGTTTTGC TCCTTGAGGA GGTCAAGCCA ATCCTGGACC GTCTTGAGAA GCTCGCGGAT
CGGTTTCGCG GCGCAAGTCA TGAGCATTCC CAGTTCCTTC GCATTGGAAC GATAGACAGC
GCGGCGGCAG GCCTGGTCCC GCAGCTTCTA CAGGATTTTC GAGAAGTCTC TCCGGGCACG
ATCGTCCAGA TCGTCGAAGA TAAGACCATT AGGCTGGTGC CTAAGCTTCT GGCCGGACGG
CTTGACGTCA TTCTGATCCG GCCTACGCAT GGGTTGAGCC GCGCCATCTC GGTGAAGCCT
TTGTTTTTCG AAACAGCGGT CGTCGCCGTT TCATCTACCA ATCCGCTTGC TGCGGCTGGC
GAGGTAACGG TGGACGCCTT GGTAGACGAA CCGCTCATCG TCCCGGATCG CCGGTCTCGT
CCCCACAGTC ACGATCTTAC GATGAACATA TTCGCAAAGG CTGGGCTCCG CCCGCGTATC
GCGCAGGTCG CGGACGAGAA GCAGACGATC ATCAATCTCG TCGCAGCGGG CATCGGATCC
GCGATCGTAC CGCGTTGGAC GGCGAAGCTG ACCGTCAAAG GCCTGAAGTT CCTGTCGATC
CGCACGTCGG ACGACAGCCG GCTGGAAACG CTTCCGCTCG CGGCAGCCTG GATGAAGGGT
GTTAGAGACG CAGGCCGGGA TCAGCTCATC AAGCTTATGG GCGACAACGC TGATCGTTAT
TTCGAACACG CATAG
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| Protein sequence | MELEQLRCFV VVADELHFGR AAQKAGILPA SLGRHVRLLE ESLGTQLFVR TTRSVNLTQD
GVLLLEEVKP ILDRLEKLAD RFRGASHEHS QFLRIGTIDS AAAGLVPQLL QDFREVSPGT
IVQIVEDKTI RLVPKLLAGR LDVILIRPTH GLSRAISVKP LFFETAVVAV SSTNPLAAAG
EVTVDALVDE PLIVPDRRSR PHSHDLTMNI FAKAGLRPRI AQVADEKQTI INLVAAGIGS
AIVPRWTAKL TVKGLKFLSI RTSDDSRLET LPLAAAWMKG VRDAGRDQLI KLMGDNADRY
FEHA
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