Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_9079 |
Symbol | |
ID | 7367806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011984 |
Strand | + |
Start bp | 54054 |
End bp | 54428 |
Gene Length | 375 bp |
Protein Length | 124 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643644299 |
Product | transposase |
Protein accession | YP_002542596 |
Protein GI | 222083193 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACAAA AATCCGGGCC GCAGACATCG ACGACCGAGA AGACGATCAA GGACATCCGC CGCGCCACGC GCAAGCACCA TTCGTCGGAA GAGAAAATTC GCATCGTGCT GGAAGGCCTT CGTGGCGAGG ACAGCATTGC CGCAATCTGC CGACGTGAAG GGATTGCCGA GAGCCTGTAT TATAGCTGGT CCAAGGAATT CCTCGAAGCT GGCAAGAAGC GGCTTGCGGG CGACACCGCC CGTTCGGCAA CCACTGACGA GGTGAAAGCA CTGCGCCGTG AAAGCCGCGA CCTGAAGGAG GCTCTGGCCG ACCTCACCCT GGAAAACCGC CTGCTTAAAA AAAGCATGAT CGGGGATGGG GGCGGCGACG AATGA
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Protein sequence | MRQKSGPQTS TTEKTIKDIR RATRKHHSSE EKIRIVLEGL RGEDSIAAIC RREGIAESLY YSWSKEFLEA GKKRLAGDTA RSATTDEVKA LRRESRDLKE ALADLTLENR LLKKSMIGDG GGDE
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