| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9054 |
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| Symbol | |
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| ID | 7367788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011984 |
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| Strand | - |
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| Start bp | 35626 |
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| End bp | 36870 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643644282 |
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| Product | hypothetical protein |
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| Protein accession | YP_002542579 |
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| Protein GI | 222083176 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGACT TCGAGGCTCA TATCGACCTT GCTGGAGAGA CTCGTAGAAT TGGTCTTGCG
AGGAGCAATC GCATCCGCGG CTCCGAGACC ATACTGTTCG AGTATGACGA TGCCTGGCTG
AAGGATCCTG ATCGCTTCTC GCTGGAACCC GCGCTTGCAT TGACCCGTGG GGCCTTCGCT
CCGCCGGCAG GATTGGCGAC GTTCGGATCG ATCGGCGACT CCGCCCCCGA CACCTGGGGA
CGACGGCTCA TGCAGCGCGC CGAGCGTCGC AGTGCGGAAC GCGAGGCGCG AGCTGTTCGC
ACCCTCGCCG AAAGCGACTA CCTGCTGGGC GTCGCCGACG AAACCCGTCT CGGCGCGCTT
CGATTCCGGT GGGTCGGGGA GGAGGTCTTC CAGGCTCCGA TCCAGACCGG CGTTCCGGCC
GTCATCGAGC TTGGTCGGCT TCTGCAGATT ACTGAGCGCA TTTTGCGTGA CGAAGAGACT
GACGAGGACC TCCAGCTCAT TTTCGCTCCC GGTTCGTCAC TGGGCGGCGC TCGACCGAAA
GCATCTGTCA TCGATCAGCA TGGCCATCTT TCCATCGCCA AGTTTCCAAA AGAGACCGAC
GAGTACAGCA TGGAGACCTG GGAGGAGATC GCCCTCCGAC TCGCCGACCA GGCCGGCATC
GCCACTCCGC AACACCAGCT TATCGAAGTG GCCGGAAAAG CCGTCATGTT GTCTCGTCGC
TTCGACCGCA ACGGCGCCAT CCGCGTTCCA TTTCTGTCAG CGATGGCAAT GATGGGCGCC
AGGGATGGCG AGCGCGGCAG TTATCCGGAA ATTGTCGATG CGCTCGCCGA GCACGGGGCG
CAAGGGAAGA GCGACGCCCA TGCTCTTTAT CGGCGCGTGG TCTTCAACGT GCTGATCTCC
AATGTTGATG ATCACCTGCG CAACCACGGA TTCTTATGGT TGGGGAAAGC TGGCTGGTCG
CTGTCGCCGG CCTACGATCT CAATCCTGTT CCAACCGATC TCAAGGCACG GGTGCTGACC
ACCAATATCG ACCTTGACGA AGGCACGTGC TCGCTTGATC TTCTGGAAGC TGCATCGGGA
TATTTTGCGC TCACGCTGGC TCAGGCACGC GTCATTATCA AAGAGGTCGC AACCGTTACC
TCTACTTGGC GAGATACGGC CAAGGCGATC GGCGCGCGGA ATAGCGAAGT CAATCGCATG
GCCAGCGCCT TCGAGCACGA GGACCTACAG CGAGCGCTTG CTTAG
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| Protein sequence | MTDFEAHIDL AGETRRIGLA RSNRIRGSET ILFEYDDAWL KDPDRFSLEP ALALTRGAFA
PPAGLATFGS IGDSAPDTWG RRLMQRAERR SAEREARAVR TLAESDYLLG VADETRLGAL
RFRWVGEEVF QAPIQTGVPA VIELGRLLQI TERILRDEET DEDLQLIFAP GSSLGGARPK
ASVIDQHGHL SIAKFPKETD EYSMETWEEI ALRLADQAGI ATPQHQLIEV AGKAVMLSRR
FDRNGAIRVP FLSAMAMMGA RDGERGSYPE IVDALAEHGA QGKSDAHALY RRVVFNVLIS
NVDDHLRNHG FLWLGKAGWS LSPAYDLNPV PTDLKARVLT TNIDLDEGTC SLDLLEAASG
YFALTLAQAR VIIKEVATVT STWRDTAKAI GARNSEVNRM ASAFEHEDLQ RALA
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