| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8198 |
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| Symbol | repA |
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| ID | 7365094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011982 |
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| Strand | + |
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| Start bp | 141732 |
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| End bp | 142943 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643641793 |
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| Product | replication protein A |
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| Protein accession | YP_002540090 |
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| Protein GI | 222080227 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1192] ATPases involved in chromosome partitioning |
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| TIGRFAM ID | [TIGR03453] plasmid partitioning protein RepA |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGCGA GCCAGCAGCA AGTCGAACCC GCAGAATCAT CGGCGGCAAA AATCAGCCGG
CAGTCTCGAT TGTTGTCTGC ACAGCTGAGG TCGATTCGCG AGCGCCTCTA CGAACCCGTA
GCAGCAAAGA CTCTGAAGAC CTTCACGTCG CGCGAAGCCG CGATGCTGCT GGGGATTGCG
GAATCAACAC TTCGTCAGAT GTCGCTCGAT GGAGAGAGCG CAATACCCGA TCGCCGGGAT
AATGGGCGAC GAATTTATAC GCTTCACCAA GTAAATCAGA TACGCCAGCA TCTCGCTCAA
AAGCGCCCGA ATGAAGCACT TGAGTTTTTC CCACGCCGCC GAGACGGTGA AAAATTACAG
GTCATTGCTG TTGCAAACTT TAAGGGAGGC TCAGCAAAAA CGACGACAAC GGTCCATTTG
GCGCATTATT TGGCAATCCA GGGGCTCCGG GTTCTTGCGA TCGACCTCGA TACGCAAGCA
TCACTGTCAG CAATATTTGG ATACCAGCCG GAGTTCGACG TTGACCAGAA CGAGACCGTC
TATGCAGGAA TTCGCTATGA TCGACGTCGC AAGGCTGTCC AAGATGTGAT CCGAAAGACC
TATTTCGCCG GGATTGATTT GATCCCGGCG AACCTGGAAC TTATGGAGTA TGAACACGAA
ACTCCGCAGG CGATTGCAGA CGGCTACGGA CGGGGAGAAG AGATTTTCTT TCGCAGGTTG
TCTGCGGTCA TCAGTGAAGT TGAGGCTGAC TACGACATAG TACTTATCGA CGCCCCACCT
CAGCTGGGTT ATCTTACTCT TGGCGCCCTA TGCGCTGCCA CGGCGCTTCT TATCACCATT
CATCCGGCGA TGATCGACGT CGCGAGTATG AACCAGTTTC TGGCTACGAT GAGCGATCTC
ATGGGCGTGA TCGAGGCACG TGGCGGCACG CTCAGTCACG ATTTCATTCG CTACTTGATC
ACGCGACATA ACCCAAACGA CGGTCCTCAA GTTAATGTCG TCACTTTGTT GCGATCCCTT
TTCAAAGAAG ATGTTTTGGC CCCCGTTGTC GTTGAAACCA CCGCGATCGC GATCGCGGGC
CTCGAAAAGA AAAGTCTTTA TGAATTGTCG AGAGGAAGCG TTGGGCGCGA TACACTTTCC
CGTGCACTCG AGTCGGTAGA TTCGGTCAAC CGAGAAATCT TCCTCTATGT TAAGAACGTG
TGGGGTAGAT GA
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| Protein sequence | MIASQQQVEP AESSAAKISR QSRLLSAQLR SIRERLYEPV AAKTLKTFTS REAAMLLGIA
ESTLRQMSLD GESAIPDRRD NGRRIYTLHQ VNQIRQHLAQ KRPNEALEFF PRRRDGEKLQ
VIAVANFKGG SAKTTTTVHL AHYLAIQGLR VLAIDLDTQA SLSAIFGYQP EFDVDQNETV
YAGIRYDRRR KAVQDVIRKT YFAGIDLIPA NLELMEYEHE TPQAIADGYG RGEEIFFRRL
SAVISEVEAD YDIVLIDAPP QLGYLTLGAL CAATALLITI HPAMIDVASM NQFLATMSDL
MGVIEARGGT LSHDFIRYLI TRHNPNDGPQ VNVVTLLRSL FKEDVLAPVV VETTAIAIAG
LEKKSLYELS RGSVGRDTLS RALESVDSVN REIFLYVKNV WGR
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