| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8157 |
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| Symbol | potF |
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| ID | 7365068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011982 |
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| Strand | + |
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| Start bp | 106492 |
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| End bp | 107529 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643641770 |
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| Product | ABC transporter substrate binding protein (putrescine) |
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| Protein accession | YP_002540067 |
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| Protein GI | 222080204 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAAAT ACGGACTCCT TATTGCAACA ACGAGCCTGC TTCTTGCGGG AACGGCGCTC
AGCGCAACCG CCGAGGAACT TCACATCTAC GCCTGGGGCG GCGGAGAGGT GCCACAGGAA
ATCGTCGATG ACTTCGCGAA GGAGACTGGC ATCGATGTCA CCATGGATAC GTACGATTCC
AACGAGACCA TGCTGGCGAA GTTGTCGGCG GGCGCTTCAG GCTACGATCT CGTCGAGCCG
ACCCAAAATG CGGTACAGGT TCTCGCCAAG CAGGGCCTGC TACTCGAACT GGACCATTCC
AAGTTGCCAA ACCTTGGCAA TCTGGGGGCT ACCTTTAAGG ACGTTTCCTA TGACCCCGGC
TTAAAATTCA ACGTACCTTA TGTTTGGGGC ACCACGGGGC TCGCCTACAA CGATGACTGC
GTCAAACAAC CCGTGACGAG TTGGAAAACG CTATGGGATC CGCAGTACCA GGGTCGCATC
TTCATGCTCG ACAATATGCT TTCGGCCTAC ATCGTCGCCC TCCAGGTCAA CGGGTTCCAT
GCAGGAACGA GCAAGCCTGA GGAAATCGAA AAGGCGACGC AGTCGTTAAT CGAGCAGAAA
AAGGTTCTCG GCGGATACAA TAGCAGCAGC TTCCCCGAAC TTGTTTCCTC CGGAGAAGCA
TGCATCGTCC AGGCATGGAA TAACAACGTC AGCCAGGTCC TCACGGAAAA TCCGAAGGTC
CACTACGTCA TTCCGGACGA GGGCGGATCG ATGTGGATTG ATGGTTTTGC CATTCCCAAG
AACGCCAAAA ATATCGAGGC AGCCTACAAG TTCATGGACT ACATCATGAA GCCTGAGGTC
GCGGCCAAGG CGGCAACCCT CAGCAAGGCC GCTACCGTCA TCGACGCAGC GAAGGCGCTG
CTGCCGAAGG AAGTGGCCGA CAACCAGGCA ATCTACCCGG CGGCCGACAA GCTGAAGAAG
GTTGATTTCA TCCTTGATGT CGGGGACGCC ATGAAACTCT ATCAAGACGG TTGGACAAAG
CTGAAGACTG CCCAGTAG
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| Protein sequence | MLKYGLLIAT TSLLLAGTAL SATAEELHIY AWGGGEVPQE IVDDFAKETG IDVTMDTYDS
NETMLAKLSA GASGYDLVEP TQNAVQVLAK QGLLLELDHS KLPNLGNLGA TFKDVSYDPG
LKFNVPYVWG TTGLAYNDDC VKQPVTSWKT LWDPQYQGRI FMLDNMLSAY IVALQVNGFH
AGTSKPEEIE KATQSLIEQK KVLGGYNSSS FPELVSSGEA CIVQAWNNNV SQVLTENPKV
HYVIPDEGGS MWIDGFAIPK NAKNIEAAYK FMDYIMKPEV AAKAATLSKA ATVIDAAKAL
LPKEVADNQA IYPAADKLKK VDFILDVGDA MKLYQDGWTK LKTAQ
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