| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8015 |
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| Symbol | |
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| ID | 7365145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011982 |
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| Strand | + |
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| Start bp | 13818 |
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| End bp | 14705 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643641697 |
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| Product | Ku protein |
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| Protein accession | YP_002539994 |
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| Protein GI | 222080131 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1273] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02772] Ku protein, prokaryotic |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGCGC ATCGGGCTCA GTGGAAGGGT CACTTGAAGG TCGGCGAACT GAGCTGTGCC
GTCGGGCTTT ACACCGCAGC GTCCACATCA GAGCGGCTCA GCTTCCACAT GATCAACGAG
GCGACGGGAA ACCGTTTGAG GCGCGAATTC ATCGACAGCG AGACCGAGGA GACAGTAGAA
CGCGATCAAC AGGTGAAGGG CTTTGAGACC GGCAACGGTG ATTATATCAT GATCGACCCG
GAAGAAGTCG CGGCAGTCGT GCCGGACTCC GACAAGATGC TGGAGGCCGA AGCCTTTATC
CCCTGCGGAA AAATCGATGA CGTCTATTTC GACAAGCCCT ACTACCTCGT CCCGGTCGAT
GATGCGGATC ATGACGCTTT CACCAGCATT CGGGATGCCT TGGTCAAGAC CAGTGCCACG
GCAATTGCGC GGACGGTCCT CTTCCGCCGG ATGCGAACCG TCCTGATCCG GGCGCATGGT
AAAGGCATTA TCGCGACGAC CCTCAACTTT GACTACGAGG TCCGATCCTC CCAGGAGGCA
TTCAAGGATG TTGCGAAGAT CAAGGTCGAA GCCGAAATGC TTGAACTGGC CAAGCATATT
ATCGGAACAA AGAAGGGTGA CTTCGACCCG GCCAAGTTCG ATGACCGCTA TGAAGACGCA
CTGGCCGCCC TGGTAAAGGC AAAGGCCGAA GGCAAGGCCC TTCCGAAGCC GAAGCCCGTC
AAGGTCTCCA AACCCAACGA TCTCCTGAAG GCGCTGCAGG AGAGTGCTGG CATGGGTAAG
CCGTCGGCGA AGAAACCGAA GGCCGCCAAC GCCAACGCGG GCAAGAAAGC GCCTGCTTCA
AAGTCCACCA AGAGCCGGGC AAAACCCGCA GCTAAGAAAG CGAGCTGA
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| Protein sequence | MAAHRAQWKG HLKVGELSCA VGLYTAASTS ERLSFHMINE ATGNRLRREF IDSETEETVE
RDQQVKGFET GNGDYIMIDP EEVAAVVPDS DKMLEAEAFI PCGKIDDVYF DKPYYLVPVD
DADHDAFTSI RDALVKTSAT AIARTVLFRR MRTVLIRAHG KGIIATTLNF DYEVRSSQEA
FKDVAKIKVE AEMLELAKHI IGTKKGDFDP AKFDDRYEDA LAALVKAKAE GKALPKPKPV
KVSKPNDLLK ALQESAGMGK PSAKKPKAAN ANAGKKAPAS KSTKSRAKPA AKKAS
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