| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7402 |
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| Symbol | |
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| ID | 7380438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 375396 |
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| End bp | 376295 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643641466 |
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| Product | Transcriptional regulator |
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| Protein accession | YP_002539763 |
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| Protein GI | 222102724 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.178146 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTCAA AAAAAGTCAA ATGGGAGGAG ACCATGACTT ACAAAAGCAT CAGAGCACTG
GAGCGCGGTA TAGACGTGTT GCAGTACCTC AATACGGTTA AAGGAGCTGC ACCGCCGGAG
ATTGCTGAAA ACGTCAATCT TCCACGTCCT ACAGTCCATC GAATTCTTGA AACGCTGAGC
GAACTCAACT TGGTCTATCG CAGTCAGCTT GGAGACGAAT ATCGTCTTAG CTCTGGCGTG
CAGCGATTGG CGGGCAACAG GTCATCCGTG CGGCTGAATT GGATTGATGA AATCGCCTTG
CCAGCACTGC TCGAACTCAC ATCGGAGATC ATTTGGCCGT CGGACATTGC TGTTTGCCAC
AAAGCTGCAA TGATCATCCA GGGAACCACA CATCGCATCA GTCCCATGTC GTGCGATGTC
GGAATGGTGG GCAATCGGCG TTCCATGCTG ATGAGCCCGC TGGGCCGTGC CTATCTCAGT
CACTGCCCGG ATGACGAGCT AAAGTCTATT CTTTGCGCTC TGAACGCGTC ATCGGCATCT
GAGGATAAGG GCGCGCGCGA TCGCGCTTTC ATTAAGGAGA TTATTGAAAC GGGTCGTCGT
GATGGTGTTA GCGCCTGCAA CGAACGACCG CACCCGCGAT GCGCCAGCCT TGCTGCACCC
ATTCGCTTGA ATGGGAAGGT ACTTGCCTGC ATGAACGTTG TCTGGCGGGC CAATATGCTC
ACGATTGAAG ACGCAATGGA TCAGATACGT GACCCATTGC TCGCGACGCG TGACCGGATC
GAAGCTCAAC TCCACGAACA GTTCGCACGA CCGGCGCTGG GCTCGACAAG CTTCCCTGAA
ACATACACCC TGCGGACGGG AACGCGTGAT CGCTTGCCTC ACAGTCTAGC CCTTGCTTGA
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| Protein sequence | MFSKKVKWEE TMTYKSIRAL ERGIDVLQYL NTVKGAAPPE IAENVNLPRP TVHRILETLS
ELNLVYRSQL GDEYRLSSGV QRLAGNRSSV RLNWIDEIAL PALLELTSEI IWPSDIAVCH
KAAMIIQGTT HRISPMSCDV GMVGNRRSML MSPLGRAYLS HCPDDELKSI LCALNASSAS
EDKGARDRAF IKEIIETGRR DGVSACNERP HPRCASLAAP IRLNGKVLAC MNVVWRANML
TIEDAMDQIR DPLLATRDRI EAQLHEQFAR PALGSTSFPE TYTLRTGTRD RLPHSLALA
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