Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_7397 |
Symbol | |
ID | 7380434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011981 |
Strand | - |
Start bp | 371039 |
End bp | 372187 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643641462 |
Product | Selenocysteine lyase |
Protein accession | YP_002539759 |
Protein GI | 222102720 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0520] Selenocysteine lyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.354097 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTCCCA GCCAAAGACA TGCGTTTTCA ATTCCCGAAG ACGTGATCTA CCTCGATGCG GCCTACATGT CGCCGATCCC GAACATCGCC ACTGAGGCCG GTTGCGATGG GGTTCTGGTC AAGGCGGCTC CCTGGGACAT GACCATCAAC TCCTACTATG ACGAGGTGGA GCGCGTCAGG GAGCTTGCCG CATCGTTCGT CGGAGCATCC ATCGACGACG TCGGCGTTAT TCCGGCAACC AGCTATGGGA TCGCTGTTGC CGCAGCAAAT GTTCACGTTA CGCCTGGCTC CGTCATCATG ATGATGGACA ACGAGCATAC GTCGCACCGC TATGCCTGGT ATGAATTGGC CGAGAAGAAG GGAGCGACGG TTGTAACGGT GCCTCGTCGT CCTGACCAGG AGTGGGGTTC AGCGCTCGCA GCCGCCATCA AGGGCTCAAC CGTTCCTGTG TCGGTCGTGG CCGGTACCAT CGTCCATTGG TTCGAGGGCA TGAGCGTCGA TATCGAGGTC GTCGCCGATG CGGCCCATGC GGTCGGAGCT GCCCTCGTGA TGGATGGTAC GCAATGGGTC GGCGCCGTGC CCTTCGATGT CTCCAGGATA CGCCCTGACT TCCTATCCTT TGCAACCTAC AAGTTTTTGC TCGGCCCTTA TCGTTTGGCA TTCCTTTATG CCGACAAGAA ATGGCAGGAA GCCGGCAAGC CGATCGAATT CCATTCGTGG AACCGCAAGG GCGGGGAGCG GCCGGATTTC TACCTTGAAA CTATGCCAGA TTATCTTCCG GGTGCGCGCC GGTTCGACAT GGGCGAACGG TCTGACTTCG CCGTGCTGCC GATTGCCATT CGTTCGCTCG AGCTTCTGCA GAGCTGGGGA TCGACTGCGG TCTTCGAGCG CCTGGTGCAT CTGAACGAAT TGATCTGGAA GGAAGCGGAA GCGCGGGGCT TTGAAGGTCC CCGGAAGGAC CTCCGCGCAC CGCACATATC GGTTATAGAG CTCGGACAGC GTTTCCGGCC GGATTTCGCC AGAAACCTGA AGGACAACAA GGCCTTTGTC ACCGTTCGTG GCACCAAAAT GCGGATCACT CCACACGTCT ACAATGAAGA GCACGATATC CGCAGGCTTT TTGAACTGGT CGATAGCCTG ACACGATAA
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Protein sequence | MLPSQRHAFS IPEDVIYLDA AYMSPIPNIA TEAGCDGVLV KAAPWDMTIN SYYDEVERVR ELAASFVGAS IDDVGVIPAT SYGIAVAAAN VHVTPGSVIM MMDNEHTSHR YAWYELAEKK GATVVTVPRR PDQEWGSALA AAIKGSTVPV SVVAGTIVHW FEGMSVDIEV VADAAHAVGA ALVMDGTQWV GAVPFDVSRI RPDFLSFATY KFLLGPYRLA FLYADKKWQE AGKPIEFHSW NRKGGERPDF YLETMPDYLP GARRFDMGER SDFAVLPIAI RSLELLQSWG STAVFERLVH LNELIWKEAE ARGFEGPRKD LRAPHISVIE LGQRFRPDFA RNLKDNKAFV TVRGTKMRIT PHVYNEEHDI RRLFELVDSL TR
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