| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7395 |
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| Symbol | |
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| ID | 7380432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 369188 |
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| End bp | 369874 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643641460 |
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| Product | ABC transporter membrane spanning protein |
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| Protein accession | YP_002539757 |
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| Protein GI | 222102718 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.158654 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTGATT TCGGATCTTA TCTCTCCGGT GAACTTATCA CAGGCTTGCA GACGACAATT
GTGCTGTTCC TGGCTTCTGC TATCACCGGC AACCTGTTGG CGCTTCCGGT GGCGCTGGGC
AGGATATCCA CGCGGAAGTG GATCAGATAT CCTGTTATCG GTTTCATGCT CTCGTTTCGC
GGCACACCGC TTCTGGTCCA GCTTTACATC TTCTACTTTG GCGTCGGCCA GGTTCTGGCA
ACAGTTCCGG CAATCCGCTA CAGCCCTCTT TGGCCGCTGT TGCGCAGTGC AAATGGCTAT
GCTTACGTCG TGCTTTCGTT GAATACTGCC GCCTATTGTG CGGAAATTTG GAGAGGTGCC
ATTCTCGGCC TCCCGATCGG GCAAAGCGAG GCGGGTCGCT CGCTTGGATT GTCCAAACAA
CGAATCACTG TATCAATCCT GCTTCCTCAG GCATTCCGGC TGGCGCTTCC GGCGATTGGC
GGCCAGAACA TCCTACTTTT GAAGGGAACA GCGCTGACCG CCGCCATTAC GGTTTTTGAG
ACAATGGCAA CGGCCAACCT TGTTCGCGCC CAGACCTTTC GAACCTACGA GCCGCTGCTC
GCAGCAGCTC TTGTCTACTT TGTCCTGGCC TCGATCATCA CCTCTGGCTT CAAATATATG
GAAACCCGGT TGGCTTCCCG ATACTAA
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| Protein sequence | MSDFGSYLSG ELITGLQTTI VLFLASAITG NLLALPVALG RISTRKWIRY PVIGFMLSFR
GTPLLVQLYI FYFGVGQVLA TVPAIRYSPL WPLLRSANGY AYVVLSLNTA AYCAEIWRGA
ILGLPIGQSE AGRSLGLSKQ RITVSILLPQ AFRLALPAIG GQNILLLKGT ALTAAITVFE
TMATANLVRA QTFRTYEPLL AAALVYFVLA SIITSGFKYM ETRLASRY
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