| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7377 |
|---|
| Symbol | xylG |
|---|
| ID | 7380417 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011981 |
|---|
| Strand | - |
|---|
| Start bp | 352408 |
|---|
| End bp | 353241 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643641445 |
|---|
| Product | ABC transporter nucleotide binding/ATPase protein (xylose) |
|---|
| Protein accession | YP_002539742 |
|---|
| Protein GI | 222102703 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.178146 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCAAA ATGACCAAGC GGCCCCGAAA ACGGGTGGCC CTATTCTGAA ATTGCGCAAT
ATTTCCAAGA ATTTTGGTGC TGTCTCTGCG CTGACGGATA TTGATCTGGA AGTGTGGCCC
GGCGAAGTGG TGGCCCTTGT GGGCGATAAC GGCGCTGGCA AATCCACCTT GATCAAGGTG
CTGGCTGGCG TGCATCAGCC CACCTCCGGC ACCATCGAAT TTTGCGGCGA AAACGTTTCG
CTCGATAGTC CCAGCCGGGC GCTGGAGCTG GGCATTGCCA CGGTGTTTCA GGATCTTGCC
TTGTGCGAAA ATCTGGATGT GGTGGCCAAT CTTTTCCTTG GTCACGAGCT TGCGCCGTGG
AACCTTGATG AAGTGGCCAT GGAAGTGCGC GCATGGACGC TTTTGAAAGA GCTGGCAGCG
CGGATTCCAT CGGTGCGAGA GCCGATTGCC TCGCTCTCCG GCGGTCAACG CCAGACGGTT
GCCATTGCCC GCTCGCTGCT GCTGGACCCG AAAATCATCA TGCTGGATGA GCCGACGGCG
GCACTGGGTG TTGCCCAGAC AGCCGAAGTT TTGAACCTGA TTGAGCGGGT GCGCGAGCGC
GGGCTGGGCG TCATCATCAT CAGCCACAAT ATGGAAGATG TGCGCGCCGT GGCCGATCGC
ATTGTGGTGC TGCGTCTGGG CAAGAACAAC GGCGTGTTTA CCCCGGATGC CTCCAATCAA
GAGCTGGTTG CCTCCATCAC CGGGGCCACG GAAAATTCCG TCTCACGCCG CCTGACCCGC
AAGACAAATA GCCAAGAAAC CAGCGCCCCA GACACGAGGG GGAGACCCGC ATGA
|
|---|
| Protein sequence | MVQNDQAAPK TGGPILKLRN ISKNFGAVSA LTDIDLEVWP GEVVALVGDN GAGKSTLIKV
LAGVHQPTSG TIEFCGENVS LDSPSRALEL GIATVFQDLA LCENLDVVAN LFLGHELAPW
NLDEVAMEVR AWTLLKELAA RIPSVREPIA SLSGGQRQTV AIARSLLLDP KIIMLDEPTA
ALGVAQTAEV LNLIERVRER GLGVIIISHN MEDVRAVADR IVVLRLGKNN GVFTPDASNQ
ELVASITGAT ENSVSRRLTR KTNSQETSAP DTRGRPA
|
|---|
| |