| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7355 |
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| Symbol | |
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| ID | 7380564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 332202 |
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| End bp | 333254 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643641427 |
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| Product | ABC transporter nucleotide binding/ATPase protein (sugars) |
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| Protein accession | YP_002539724 |
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| Protein GI | 222102685 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.216197 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATCG TCAATGTCGG CAAGGCCTAT GGTAGCCTGA GGGTTATCCA TGGCGTTTCC
GTCGAGATTC CTGATGGTGA ATTCGTTGTT CTTGTCGGCC CATCGGGATG CGGCAAGTCC
ACGCTGCTGC GCATGGTTGC TGGGCTGGAG CCGATCACCT TTGGCGATGT CGTTATCGAC
GGAAAGGTCG TCAACGACCT GCCGCCAAAG GATCGCGATA TCGCCATGGT GTTCCAAAGC
TATGCACTTT ATCCGCACAA GACGGTGGCG GAGAATATGG GCTTTGCGCT GAAGATGCGC
GGTGAAACCA AGTCCTTCAT TGACGAGCGC GTTCGCAAGG CAGCGGAAAT TCTCGATCTG
GTCCCCTATC TGGCCCGCTA TCCCCGTCAG CTTTCCGGCG GGCAGCGGCA GCGCGTGGCG
ATGGGCCGGG CGATTGTGCG AGATCCGAAG GTTTTCCTGT TTGACGAACC ACTGTCCAAT
CTCGATGCGA AACTGCGCGT GCAAATGCGG GCTGAAATCA AGGAATTGCA ACGCCGTCTG
GCGACGACGA TGATTTACGT CACCCATGAC CAGGTCGAAG CCATGACCAT GGCGGACCGT
ATCGTCGTGT TGCGGGATGG TCGCGTCGAG CAGATCGGCT CGCCGCTAGC GCTTTACGAC
GCGCCAGCCA ACATGTTCGT GGCTGGGTTT ATCGGTTCGC CCTCAATGAA CCTGATCAAG
GGTCATATCC GGGCATCAAC AACACCATTT TTCGAGACCG AAGAGGGCAT CCGGCTTCCC
TTGAATTCGG CTCCTGCAGG TTCGGACGGA CGAGCGGCTT TCTACGGCAT TCGGCCTGAG
CATTTTGTGC TTGGCGGCGA TGTCACCGCT AACGTTACCG TGCTGGAATC GACCGGAACG
GAAACCCAGG TCTTTGCCCG GCTTGGCCAG CAGAAAGTTA TCGGCGTGTT CCGCGAGCGT
TTGGCAGAGC CGTCCGGACA GATGATTGCC ATGACGCCGA ACCCGGCCAT GGTCCATCTG
TTCGACGGTG AAACGGGGCT GCGGTTGGAA TAG
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| Protein sequence | MNIVNVGKAY GSLRVIHGVS VEIPDGEFVV LVGPSGCGKS TLLRMVAGLE PITFGDVVID
GKVVNDLPPK DRDIAMVFQS YALYPHKTVA ENMGFALKMR GETKSFIDER VRKAAEILDL
VPYLARYPRQ LSGGQRQRVA MGRAIVRDPK VFLFDEPLSN LDAKLRVQMR AEIKELQRRL
ATTMIYVTHD QVEAMTMADR IVVLRDGRVE QIGSPLALYD APANMFVAGF IGSPSMNLIK
GHIRASTTPF FETEEGIRLP LNSAPAGSDG RAAFYGIRPE HFVLGGDVTA NVTVLESTGT
ETQVFARLGQ QKVIGVFRER LAEPSGQMIA MTPNPAMVHL FDGETGLRLE
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