| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7293 |
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| Symbol | |
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| ID | 7380516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 249699 |
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| End bp | 252206 |
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| Gene Length | 2508 bp |
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| Protein Length | 835 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643641380 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_002539677 |
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| Protein GI | 222102638 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.607537 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGGGTCAG AGTCCCAAAC CGGGAAAATC AATCGTCTAC CCCCCGAGCA CAACGTGGCG
TTGCTCCTTA CGGTGGGCTG CAAAGCCTTG AGTACCGGAG AGTTTGGGGG TTCTATGACG
AAGACTTTTT CCACTACACA CGAGGCCCGG GCGAGCCTCA GAGCAGTCCT ATTAGCAGGA
TCGGCGCTTG TGATGTTGAC ACCTGCCCTG CCGGCAATGG TGCGAGAGGC GCAGGCTCAA
ATGTCGCAGC ACGCGATTTC CGTACCGGCC GGTCCGCTTA CTCCAGCGCT CAACAGCCTT
GCTGCCCAGA CGGGCCTCCA GATTCTGTTC GACGCGTCGG TTGCCCAAAA CAAATCAACC
CGCGGCGTGA ATGGGACGCT GACACCTGAA CAGGCCTTGA AGGCCGTGCT TGCCGGGACA
GGCGTCGATG CGCGCTTTGC CGGCGAAAAC CGGGTCACCT TGCAGAACGC GACTTCCGCC
TCAGAAAACC CGGAGCAAGA AGGAACCCTG CTCGAACCCA TCGTGATCTA CGGTGCCCGC
AATGCGACCA CGCTTGGCGG TACGACAAGC AGTGTCGCTA TTCTCAATGC CGAAAGCCTG
GCGAATAGCC AGATCCGCAC CACGCAGGAA ACGTTTCGTC GCATGGCGAA CACGATGGAC
AGCGCCACAG TCAACGCTGG TTTCGTTATC CGCGGCATGA GTTCCGAGGG CCTGGTATCG
TCCGGTGGGC CGGCAGGCTC CATCTATATC GATGGCATCC TTCAGACGCG CTACAATGCC
CGCTTCGGCG CCCGCAATCT CTGGGACGTT GAGCAGGTCG AGGTCTATCG CGGCCCGCAA
TCGACGCTCT CCGGCCGCGC CGCCATGACC GGAGCCGTCT ATATCAAATC GAAGGATCCG
ACCTTCGAAA AGGAAGTCGA AGTTTCCACG ACCGTTGGTA CCGATCATCT TGTGGGCACC
GCCATCACGG TCAACACGCC TATCGTAGAG GATCAGGTCG CGCTGCGGCT CTCCGGGTCC
TATGAACGTT CTAGGGCCCA GCCCAGCTAC TCCGATTTCA AGTCATACGA CAATTACGAC
GATCTGATCA CTGATATCAG CGGCATTGCG CGCGCCAAGC TGCTGTTGAC GCCGTCAGAG
CTGCCGGATA CCCGCGCAGT CCTCACCTAT TCCTACTCGA AGGACCGGCC GAACGACGCA
CTCGTCGGAC TCTATTCGGG ACGGGGGGAT TTCAATAACG CGCCTGTCAC CTACACCGAA
TATCGCTGGA CCGAGGCGCA TAATCTCGGA CTTGAGGTCA CCCACGACAT TTCTGAAACC
CTGCGCTTCA CATCGCAGAC CGGCTATCAA TACGGCATCA ATAACCGGCG CTCCATTGAT
TATGGCACCG AAAATGTCGT CAACGGTATC ACCGGCGAAG ATGACAACTC CATCCTCACC
CAGGAATTCC GCCTGAACTA TGAAGGCGAT CGTTGGAAAT GGGTAACCGG CATCTATGGC
AGCTACGAAA AGTGGGATGG TGCCACGGAT ATCGTTGCGT TCGATTATTA CCAGCAGAAT
GACACGCAGC ACCGCACAAC CGCGAACCTG GCCATCTTCG GTGAAGCGAC CTACGAGTTT
GCGCCGACCT GGTTTGCGAC GCTGGGCGGA CGCCTGGATT ACCTGAGAGA CAAGGACCAC
CAGCAGAATT ATTCCGGTCT GATCGATGAC TCCCCTGTCC TGACTGGCGA CCCGACGTCC
CTTACCGAGT ACAATTTCGT GCCTAAAGTC GGCATATCCA AGGAGTTCGG CAGCAACCAG
AAGGTGGGGC TCACCTATAC GGAAGGCTTC CGCTCGGGTG GGTCCTATCT CGACCGCGTG
ACGGGCGAAC TCGGCACCTA TGATCCCGAA TACTCCAAGA ACATTGAACT GTCGTACAAG
GGAACACTGC TGGACGACCG CCTGACGTTG AATGCCAATC TGTTCTACAC TAAGTATTCG
GATCAGCAGG TCGAGATCCG GCCTGACCCC TCGATCCCCG GTTATCGCAT CATTTCGAAC
GCCGCCACAT CTCGCTCCTG GGGTTTTGAA ATCGAACCGT CCATGCAGGT CACGGACCAA
TTCACCACCT TTGCATCGGT CGGTTACCTC AACACCAAGT TCATCGACTT CAACCATGCA
GCGCTCAGCG AACCGCAGGA CGGCAAGTCC TTTCCCGAAG CACCGGAATG GAGCCTGGGC
TTTGGCGGTC GTTATGAGTT CCAAAATGGT GTTTTTGTCG GAGCCGATGC CAAGTACACG
ACGAGCTATA ATTCGCGCTT CGGCACGAAC GGCATGTACA AGATTGATGC GCGCTTCATC
GTCAACGCGC AGGTGGGTTT CAAGAAGGAC AATTGGCAGG TGACGCTGTT TTCGGAGAAC
CTGACGGATG AAAAATACTT CACCCTGATT GATCCGGATT ACTCGCTGCC TTACGGCCAG
GCTGGCAAGC GCCGATCATT CGGATTGAAC CTCCGGGCCA AGTTCTGA
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| Protein sequence | MGSESQTGKI NRLPPEHNVA LLLTVGCKAL STGEFGGSMT KTFSTTHEAR ASLRAVLLAG
SALVMLTPAL PAMVREAQAQ MSQHAISVPA GPLTPALNSL AAQTGLQILF DASVAQNKST
RGVNGTLTPE QALKAVLAGT GVDARFAGEN RVTLQNATSA SENPEQEGTL LEPIVIYGAR
NATTLGGTTS SVAILNAESL ANSQIRTTQE TFRRMANTMD SATVNAGFVI RGMSSEGLVS
SGGPAGSIYI DGILQTRYNA RFGARNLWDV EQVEVYRGPQ STLSGRAAMT GAVYIKSKDP
TFEKEVEVST TVGTDHLVGT AITVNTPIVE DQVALRLSGS YERSRAQPSY SDFKSYDNYD
DLITDISGIA RAKLLLTPSE LPDTRAVLTY SYSKDRPNDA LVGLYSGRGD FNNAPVTYTE
YRWTEAHNLG LEVTHDISET LRFTSQTGYQ YGINNRRSID YGTENVVNGI TGEDDNSILT
QEFRLNYEGD RWKWVTGIYG SYEKWDGATD IVAFDYYQQN DTQHRTTANL AIFGEATYEF
APTWFATLGG RLDYLRDKDH QQNYSGLIDD SPVLTGDPTS LTEYNFVPKV GISKEFGSNQ
KVGLTYTEGF RSGGSYLDRV TGELGTYDPE YSKNIELSYK GTLLDDRLTL NANLFYTKYS
DQQVEIRPDP SIPGYRIISN AATSRSWGFE IEPSMQVTDQ FTTFASVGYL NTKFIDFNHA
ALSEPQDGKS FPEAPEWSLG FGGRYEFQNG VFVGADAKYT TSYNSRFGTN GMYKIDARFI
VNAQVGFKKD NWQVTLFSEN LTDEKYFTLI DPDYSLPYGQ AGKRRSFGLN LRAKF
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