| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7270 |
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| Symbol | dppC |
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| ID | 7380496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 225182 |
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| End bp | 226102 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643641360 |
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| Product | ABC transporter membrane spanning protein (dipeptide) |
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| Protein accession | YP_002539657 |
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| Protein GI | 222102618 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | CTGATGACCT TCACCAGCCC AGCCCCTTCG GCCATCATGG CACCGGTCCT GTCGCGATCG
ATCCCCCGAC GGATCTATGA CAAGGCTTCT TCCACACCGG GTTTTCGCAT TGGTGTCGCC
ATCTTTCTGC TGCTGGCTCT CGCAGCGGCA CTCTATCCCG AACTGAGCGG TCTCGACCCG
ACAAAAATGA ACGTGCGTGC CCGACTGCTA CCGCCCCTGT TCATTGGTGA GACCTGGAGT
TTTGCCCACC CGCTTGGCAC CGATCAGATC GGCCGTGACA TGCTGGTCCG CTCGCTGGTT
GGCTTGCGCT ATTCTTTCCT GATTGGTGTA TCCTCTGTCG TGGTGATGCT GATTATCGGT
TGCGTACTTG GCACGCTTGC TGGCTATTTT GGCGGACGCA CCGATGCGGT CATCATGCGC
ATGACCGATG CGCAGCTATC GATCCCGATG ATCATTCTAG CCATCTCGGT TCTGGGCGTA
TCGCGTCCCA CCATTCCCGC CATCATTCTT GTGCTTGGGT TGTCCAATTG GCCGGTCTAT
GCCCGCATCA TGCGCAGCAT TGTGATGACG GAGCGTCAGA GGGAATATGT CCGTGCCTCA
AAGCTCGGTG GCTCCACAGA CCTGCGCATT ATTCTGACGC TGCTCGTGCC GCTACTGCTG
CCGCCCGTGC TGTTCATCTC GGTGCTGGAT GTGGCGCGGA TGATGATTTT CGAATCCATT
CTGGGCTTTC TTGGCCTTGG TGTTCAGCCA CCGACGCCGA CCTTTGGCAA TATCATCGCT
GATGGACGCA AATATCTGCT CAACGCCTGG TGGATTGCCA CCATGCCCGG AATTTTCCTC
GGCCTGACGC TCACCAGTAT CAATCTGGTT GGCGCATCGC TGGAACGGGC AAGAAACACC
ATTCACGGAG GCGCAGAATA A
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| Protein sequence | MMTFTSPAPS AIMAPVLSRS IPRRIYDKAS STPGFRIGVA IFLLLALAAA LYPELSGLDP
TKMNVRARLL PPLFIGETWS FAHPLGTDQI GRDMLVRSLV GLRYSFLIGV SSVVVMLIIG
CVLGTLAGYF GGRTDAVIMR MTDAQLSIPM IILAISVLGV SRPTIPAIIL VLGLSNWPVY
ARIMRSIVMT ERQREYVRAS KLGGSTDLRI ILTLLVPLLL PPVLFISVLD VARMMIFESI
LGFLGLGVQP PTPTFGNIIA DGRKYLLNAW WIATMPGIFL GLTLTSINLV GASLERARNT
IHGGAE
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