| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7254 |
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| Symbol | |
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| ID | 7380400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 210993 |
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| End bp | 212084 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643641346 |
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| Product | ABC transporter nucleotide binding/ATPase protein |
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| Protein accession | YP_002539643 |
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| Protein GI | 222102604 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.467049 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACGT CAATGCATGA TGCCAGTGAA GTCCTCATCG ACTGCCAGTC TGTCTGGAAG
ATATTCGGAG CCCGGTCGAA AGCCGCCGTC GAGGCGGTCA AGACAAGGGG CCTCTCCAAG
AAGCAGATCC TGACGGAATA CGATTGCGTC GTTGGCGTCT CAGATGCCAG CCTTCAGGTT
CGACGCGGCG AGATTTTCTG TATCATGGGG TTGTCGGGCA GCGGCAAATC GACCCTGATC
CGTCTTCTGA ACAGATTGAT CGAACCGAGC CTTGGCACGA TTCTGGTCAA AGGCAAGGAT
ATCTCTGCCT TGAACGCCGC TCAGCTGCGC GACATACGCG CGCGCCATAT CGGGATGGTC
TTCCAGAGTG TGGCCTTGCT GCCAAACAGG ACCGTGCTGG AGAATGCCGC TTTCGGACTC
GAGGTCAGGG GCGTCGGTAA GGAAGAGCGA TACAAGACTG CCCGTGCGGC GCTGGACAAG
GTCGGCCTGT CGGACTGGAC GGCGCGCTAT CCCTCCGAGC TGTCGGGCGG CATGCAGCAA
CGCGTCGGTC TTGCCCGCGC TATTGCCGCC GACCCCGAGA TCATTCTGAT GGACGAGCCG
TTCAGCGCGC TCGACCCGCT GATCCGTCGC CAGCTTCAGG ACGAATTCCG GCAACTCACC
AAGTCGCTTG GCAAATCCGC CGTGTTCATC ACCCATGATC TGGAAGAAGC AATCCGCATC
GGCGATCGCA TCGCCATCAT GAAGGACGGT GTTATCGTTC AGGTCGGCAA TGCAGAAGAG
ATCGTTACGC AACCGGCAGA CGATTATGTC GCCGAGTTCG TCGCCGGTAT TTCCAGAGTT
CATCTGGTCA AGGCGCATTC TGTTATGATC CCGGTTGAGG TTTATAAGCG TGATCATCCC
GGCTCAGACA TCGACACGCT TTTGTGCGCC ACGCCGGAGG CGGATATTGG TGCGCTGATC
GCCTTGACCA TGCAGTCTGA ACGCGATGCC GTGGCCATTG CCGAGGACGG CAACGTCATC
GGCATTGTCA CCACGCGCGG CCTGCTCTGC GGTGTCGCAG GCAGTCCGGC CCAGCCGACC
GCAGCGGCAT AG
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| Protein sequence | MTTSMHDASE VLIDCQSVWK IFGARSKAAV EAVKTRGLSK KQILTEYDCV VGVSDASLQV
RRGEIFCIMG LSGSGKSTLI RLLNRLIEPS LGTILVKGKD ISALNAAQLR DIRARHIGMV
FQSVALLPNR TVLENAAFGL EVRGVGKEER YKTARAALDK VGLSDWTARY PSELSGGMQQ
RVGLARAIAA DPEIILMDEP FSALDPLIRR QLQDEFRQLT KSLGKSAVFI THDLEEAIRI
GDRIAIMKDG VIVQVGNAEE IVTQPADDYV AEFVAGISRV HLVKAHSVMI PVEVYKRDHP
GSDIDTLLCA TPEADIGALI ALTMQSERDA VAIAEDGNVI GIVTTRGLLC GVAGSPAQPT
AAA
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