| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7251 |
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| Symbol | |
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| ID | 7380397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 208262 |
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| End bp | 209260 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643641343 |
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| Product | hydroxyproline-2-epimerase |
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| Protein accession | YP_002539640 |
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| Protein GI | 222102601 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3938] Proline racemase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.367243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGCACA GCTTCTTTTG TATCGACAGC CATACATGCG GCAATCCTGT CCGCCTCGTT
GCCGGGGGCG GACCGCTTCT GCCGCATTTG CCAATCGCTG AGCGTCGGGA ACTGTTTGTC
CGGGACCATG ACTGGGTGCG AAAAGCCCTG ATGTTCGAAC CGCGCGGCCA TGACGTCATG
TCCGGTGCGA TCATTTATCC GGCCTACCGC GACGACTGCG ATTTCGCAGT CATTTTCATC
GAGGTCAGCG GATGCCTGCC GATGTGCGGA GCCGGTACGA TTGGCTTGGT GACAGCCGGT
ATCGAGGAAG GCCTCATCAC GCCTAGGGTC GAAGGACAGC TTTCCATCGA AACTCCGGCT
GGTCGGGTGG ATATACACTA TGAAAAGCCT GGCGCATTCG TGGAATCCGT TCGTATGTTC
AACGTGCCGA GCTATCTCCA CGCAGCAGAT GTCGAGGTTG ATATTCCCGG CATCGGGCGT
CTTATTGTCG ATATTTCCTA TGGCGGCAAT TATTATGCCG TGGTGGAGCC GCAGGCATCA
TGGTCGGGGC TCGACGGCAT GTCCGGCAGT GACATCGTAG ACCTCAGCGT GAAGCTGCGA
GACGCATTGG CAGACATCTG CGATCCCCAG CATCCGGATG ATGAGCGGAT TCGAGGCGTT
CATCACGCTC TCTGGTGCGA TAAGCCGACA AGCAATGCAG CAGACGGGCG TGGAGCCGTA
TTCTACGGCG ACAAGGCCAT CGATCGCTCC CCGGGCGGGA CCGGCACTTC GGCAAGAATG
GCCCAGCTTT ACGGCAAGGG TCGATTGAAG GTGGGTGAGG CGTTTCGCCA GGAAAGTATC
ATCGGCACTG TTTTCGAAGG ACGGGTCGAG GAAGAGGTCG TTGTCGGCAC CTTGAAAGGG
ATCAGGCCGA GCGTTGGGGG ATGGGCACGG ATCATTGGTC ACAACACGAT CTTCGTGGAC
GATCGAGATC CTCTGGCTCA CGGCTTCCAG ATCAAATAA
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| Protein sequence | MRHSFFCIDS HTCGNPVRLV AGGGPLLPHL PIAERRELFV RDHDWVRKAL MFEPRGHDVM
SGAIIYPAYR DDCDFAVIFI EVSGCLPMCG AGTIGLVTAG IEEGLITPRV EGQLSIETPA
GRVDIHYEKP GAFVESVRMF NVPSYLHAAD VEVDIPGIGR LIVDISYGGN YYAVVEPQAS
WSGLDGMSGS DIVDLSVKLR DALADICDPQ HPDDERIRGV HHALWCDKPT SNAADGRGAV
FYGDKAIDRS PGGTGTSARM AQLYGKGRLK VGEAFRQESI IGTVFEGRVE EEVVVGTLKG
IRPSVGGWAR IIGHNTIFVD DRDPLAHGFQ IK
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