| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7185 |
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| Symbol | |
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| ID | 7380346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 150954 |
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| End bp | 151952 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643641294 |
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| Product | ABC transporter nucleotide binding/ATPase protein (oligopeptide) |
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| Protein accession | YP_002539591 |
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| Protein GI | 222102552 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGCTT TGATTGATGT TCGGGATTTT TCCGTTGGTT TCGGCAGCGC CCAGCCGGTC
AAGGGCGTCA GCTTTTCGGT GGAACGCGGC GAAATGCTGG CGATTGTTGG CGAATCCGGC
TCTGGCAAAT CCTTGACGGC GCTGGGTCTG ATCGGGCTTT TGCCATCGCA TGCGCAAAAG
GGCGGCTCCA TCCGCTTCAA GGGCCGCGAG CTTTTGACCT ATAGTGAACG GCAATGGCGC
GCCATTCGCG GCGGCGAGAT CGGCATGATC TTTCAAGAGC CGATGACCTC GCTCAATCCA
GTGCTGACGG TGGGCGAGCA AATCACCGAA GTGCTGCGCA TTCACGAAAA GCTGGACCGC
AAACAGGCGC GTAAACGTGC TATCGAATTG CTGGATCTCG TCAACATCCC TGAATCGGGA
AAAAGGGTGG ATGATTACCC GCATCAACTC TCCGGCGGCA TGCGTCAGCG GGTGATGATT
GCCATTGGCG TGGCCTGCAA TCCCGAACTG TTGATTGCCG ATGAGGCGAC CACAGCGCTG
GATGTGACCA TTCAGGCACA AATCCTGCAA TTGCTGGATA ATTTGCGCCG GGATTTGAAC
ATGGCGGTCA TTCTCATCAC CCATGATCTG GGCATTGTCG CCCAATGGGC GGATCGGGTT
ATGGTGATGT ATGCCGGGAG AAAGGTGGAA GAAGGTCTGC CGCAGCCGGT GTTTGATCAG
CCTTATCATC CCTATACCCG TGGTCTTCTG GCTGCGTCTC CGCGCGGCGG GGCAGGGCAG
CATTACCGCG ATGGACCCTT GGTGGAAATT CCCGGCTCCA TCACCTCTTC GGTCAATGAG
AAGGGATGTG CCTTTCGCCC TCGCTGTTCC AGCGCGCGCA CGTCTTGCGG TCAGGCCGTG
CCGTCTTTGA CGCAAGTGTC GCCGGGGCGG TTTGCAGCCT GTCCTGTGGT GTCCGCAAAC
TTTTCGGAGG TGTCCCATGA CGCTCTTGTC GGTGCGTAA
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| Protein sequence | MSALIDVRDF SVGFGSAQPV KGVSFSVERG EMLAIVGESG SGKSLTALGL IGLLPSHAQK
GGSIRFKGRE LLTYSERQWR AIRGGEIGMI FQEPMTSLNP VLTVGEQITE VLRIHEKLDR
KQARKRAIEL LDLVNIPESG KRVDDYPHQL SGGMRQRVMI AIGVACNPEL LIADEATTAL
DVTIQAQILQ LLDNLRRDLN MAVILITHDL GIVAQWADRV MVMYAGRKVE EGLPQPVFDQ
PYHPYTRGLL AASPRGGAGQ HYRDGPLVEI PGSITSSVNE KGCAFRPRCS SARTSCGQAV
PSLTQVSPGR FAACPVVSAN FSEVSHDALV GA
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