| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7121 |
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| Symbol | |
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| ID | 7380166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 96351 |
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| End bp | 97313 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643641244 |
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| Product | transcriptional regulator LysR family |
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| Protein accession | YP_002539541 |
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| Protein GI | 222102502 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0306023 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAGAC GTGTACCTCT CAACTCCGTG CGGGCCTTTG AAGCAGCAGC AAGACGCATG
AGCCTTGTGC AGGCCAGTGA CGAATTGTGT GTGACGCCGA CGGCGGTCAG TCATCAGATC
CGGCAACTTG AAGATTTCCT ACAAACCAAA CTGTTTCTGC GCCGCAGCAG CCGTCTGGAG
CTAACGCCGG AATCGCGTGC TTGCCTTGCC AAACTTACCG AAGCACTGGA CATTATAGAC
GATGCAATTG CCGCACTTCA CAAACCGATG GACATGCCGG AGCGTCTGGT GGTTGGCGCA
TCAGCCTCCG TTGGCTCTTT GTGGCTCATG CCAAGATTGC GGAATTTTTA CCGTACAGCG
CCAGAAATTG ATATTTCGCT GACCACCTTC ATTGAGCGTT CAGCGATTGA AACGGACACC
TCCGATGTCT GGATCTGCAA CTGGCACACC AATCTGGATC GGCGCGTGGA ACTCCTATTG
GAAGAGGATA TTATCCCCGT TTGCTCGCCT CAGATGGCTG AGGAGTTTGG TGAGTTGAGC
TTTGACTCCT TGCGAGAGTT ACCACTTGTG CATGTGGACC GCGCCAAGGC GAGCATTAAT
GGTCAATATC CCGATTGGGA CCGTTACTTG CGTGAATATG GCATCAGCCG CAACGATATC
GCCAAGGGGC CGCGCTTCAA TCAGGCTGGC CCGGCGATTG AGGCTGCCAA AGCGGGAATG
GGGGCGCTGC TTGGGCGCTC GATTCTGATT GAGCGTGCCT TGGAAACTGG AGAACTGATC
CGGTTGGGCG ACCCTTATCC AATTCGCAAT CCTTATTATC TCATTTCACC CCTGCAGCCG
GCCTCAAACG CCGTCAAGAT GTTCAAGGAC TGGATTTTTG CTCAGGCCAA GACCAGAACT
AGCACCTATG TTGAGTTGCC CCATAAAAAC CGGAGAGGAT CAGATTTCCG TTTGACCGTT
TAA
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| Protein sequence | MRRRVPLNSV RAFEAAARRM SLVQASDELC VTPTAVSHQI RQLEDFLQTK LFLRRSSRLE
LTPESRACLA KLTEALDIID DAIAALHKPM DMPERLVVGA SASVGSLWLM PRLRNFYRTA
PEIDISLTTF IERSAIETDT SDVWICNWHT NLDRRVELLL EEDIIPVCSP QMAEEFGELS
FDSLRELPLV HVDRAKASIN GQYPDWDRYL REYGISRNDI AKGPRFNQAG PAIEAAKAGM
GALLGRSILI ERALETGELI RLGDPYPIRN PYYLISPLQP ASNAVKMFKD WIFAQAKTRT
STYVELPHKN RRGSDFRLTV
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