Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_7100 |
Symbol | |
ID | 7380153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011981 |
Strand | - |
Start bp | 86119 |
End bp | 86688 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 643641232 |
Product | hypothetical protein |
Protein accession | YP_002539529 |
Protein GI | 222102490 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4448] L-asparaginase II |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGATC GCTACACACT TGATTCAAAA GAATATCATC AAATTGATAC TCTGGTTTCA TCTATCAAGC ATAGAGCTCT ACGCGCGTGG CTTTCTGAAC TCGCTGGCGA TGATGGATAT TGGGTAAATG ATAGTTGCGG CATGCCTTGT TGGGTTGCGC CGATGCACCA GCATGCGCGG CTTTGGAATG CTCTTTCCAA TTCAAATGCT AGTGCGATGG AAGCGATCAA GGAGTTGTGG ACGGCAAATC CCATTTTGAT TGGTGGAAGT AACCGCGTTG ATACGACAAT CCTTCAATTT GGCAAAGGGC GGCTGTTTGC TAAAGAAGGT GCTGATGGGC TGCTTTTCCT TCATGCCACG GGCAAAAAAG GCGAACCACC GGTCACAATC CTCGTGAAGA TGTCGCAAGC AGCTCGCGAC GAGCACCTTT ACTTCGCCGT CATCATAGCC ATCAAGCAAT ACGTTCCTTC CAGGGCCACT TTGATGCACG ATTTTGCGAG TCACCTGCAA TTCATCATTG CATCAAACGT TCTCTCTTTT GAATCCACTT TAGAACCTCG GAAAAGCTAA
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Protein sequence | MFDRYTLDSK EYHQIDTLVS SIKHRALRAW LSELAGDDGY WVNDSCGMPC WVAPMHQHAR LWNALSNSNA SAMEAIKELW TANPILIGGS NRVDTTILQF GKGRLFAKEG ADGLLFLHAT GKKGEPPVTI LVKMSQAARD EHLYFAVIIA IKQYVPSRAT LMHDFASHLQ FIIASNVLSF ESTLEPRKS
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