Gene Avi_7100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_7100 
Symbol 
ID7380153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011981 
Strand
Start bp86119 
End bp86688 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content47% 
IMG OID643641232 
Producthypothetical protein 
Protein accessionYP_002539529 
Protein GI222102490 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4448] L-asparaginase II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGATC GCTACACACT TGATTCAAAA GAATATCATC AAATTGATAC TCTGGTTTCA 
TCTATCAAGC ATAGAGCTCT ACGCGCGTGG CTTTCTGAAC TCGCTGGCGA TGATGGATAT
TGGGTAAATG ATAGTTGCGG CATGCCTTGT TGGGTTGCGC CGATGCACCA GCATGCGCGG
CTTTGGAATG CTCTTTCCAA TTCAAATGCT AGTGCGATGG AAGCGATCAA GGAGTTGTGG
ACGGCAAATC CCATTTTGAT TGGTGGAAGT AACCGCGTTG ATACGACAAT CCTTCAATTT
GGCAAAGGGC GGCTGTTTGC TAAAGAAGGT GCTGATGGGC TGCTTTTCCT TCATGCCACG
GGCAAAAAAG GCGAACCACC GGTCACAATC CTCGTGAAGA TGTCGCAAGC AGCTCGCGAC
GAGCACCTTT ACTTCGCCGT CATCATAGCC ATCAAGCAAT ACGTTCCTTC CAGGGCCACT
TTGATGCACG ATTTTGCGAG TCACCTGCAA TTCATCATTG CATCAAACGT TCTCTCTTTT
GAATCCACTT TAGAACCTCG GAAAAGCTAA
 
Protein sequence
MFDRYTLDSK EYHQIDTLVS SIKHRALRAW LSELAGDDGY WVNDSCGMPC WVAPMHQHAR 
LWNALSNSNA SAMEAIKELW TANPILIGGS NRVDTTILQF GKGRLFAKEG ADGLLFLHAT
GKKGEPPVTI LVKMSQAARD EHLYFAVIIA IKQYVPSRAT LMHDFASHLQ FIIASNVLSF
ESTLEPRKS