| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7019 |
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| Symbol | dppB |
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| ID | 7380217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 19628 |
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| End bp | 20629 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643641167 |
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| Product | ABC transporter membrane spanning protein (dipeptide) |
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| Protein accession | YP_002539464 |
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| Protein GI | 222102425 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.536293 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTCGCT TCATCGTGGA ACGGGTCTTT TCGGCGCTGT TGACGCTTTT GGGCGCCTCC
CTTATTGCCT TCATCGTGCT GCGCGCCGTG CCGACAAACC CCGCACGTCT CATTGCTGGC
CCCTTCGCGA CAGACGAGGT CATCGGGCAG GTGGAGGCAG CGCTTGGCCT CAATAAGCCG
CTTTACATAC AATATGCTGA TTATATTGTC GGATTTGTCA GAGGCGACTG GGGGTTCTCC
TATAGCGCCG GCCAGCCGGT GCTTCAGCAG ATCGGGCAAC GCCTGCCAGC TAGCGCGGAA
CTCGCGCTTT ACGCCTTTCT CTTTGCCTTC ATTGGCGCGA TATTCCTGAC GGTGTTTTCC
GTCTTTGCGC GTTCGCGCTG GCTCGATCGG TTGCTGCGTG GCTCTGCTTT CGTTTTTGTT
GGCGTTCCCC CTTTCTGGAT CGCGCTGCTT TTCCTGATCG TCTTTTCGGA GAATCTCGGC
TGGTTCCCAG GTCCTGTTGG GCGTGGCGAT GCGCCTCCGG TGGTCGTGAC AGGGCTCTAT
AGTATAGACT TCCTGCTCGG CGGCGACGTG TCCGGGTTCT TCGGCGCGCT TCACTATCTG
GCGCTTCCGA GTGTGACGCT CGCGCTCGGA TCGCTCGGTT ATCTTATCCG GCTACTGCGC
GCCAATCTGC TCGATACGGC AAACGAACCG TTTGTCACGG TGCTCCACGC CAAAGGCGTT
CGGGGCCTTG TGATTGCATT TGGCCATGTG TTGCCGAATG CCTTCTTGCC AACGCTCACG
GCTGGTGGGT TGATCCTTGC TCAGTTGCTG GGCGGGTCCG TGCTAGTCGA GCGCATCTAT
ACCTGGCCCG GTGTCGGCGG GTTGGTGATT GATGGTATCC TCAGGCAGGA TTATGCTGTG
GTGCAGGCCT TCATCCTCTT AAGCGCGTTG ATCTATATCG TCGTCAACTT CCTTATTGAC
ATCCTTTACG GTGTTGTCGA TCCAAGGGTG AGGCGCTCAT GA
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| Protein sequence | MLRFIVERVF SALLTLLGAS LIAFIVLRAV PTNPARLIAG PFATDEVIGQ VEAALGLNKP
LYIQYADYIV GFVRGDWGFS YSAGQPVLQQ IGQRLPASAE LALYAFLFAF IGAIFLTVFS
VFARSRWLDR LLRGSAFVFV GVPPFWIALL FLIVFSENLG WFPGPVGRGD APPVVVTGLY
SIDFLLGGDV SGFFGALHYL ALPSVTLALG SLGYLIRLLR ANLLDTANEP FVTVLHAKGV
RGLVIAFGHV LPNAFLPTLT AGGLILAQLL GGSVLVERIY TWPGVGGLVI DGILRQDYAV
VQAFILLSAL IYIVVNFLID ILYGVVDPRV RRS
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