| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6272 |
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| Symbol | |
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| ID | 7381312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 1265676 |
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| End bp | 1266527 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643649734 |
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| Product | fumarylacetoacetate (FAA) hydrolase family protein |
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| Protein accession | YP_002547958 |
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| Protein GI | 222107167 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.310211 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTCG TCAGTTTTAC CCGACTTGGC CGGGCCGGAT TCGGCGCGGT GGTCGGCGGT
GGCATCGTCG ATCTTACCGG TCGTCTCAGC TATGATTGCC TGACCCTGAA ACAGGCGATC
CTGGACGATC TCCTGGAAAT TGCCGCTGAC TATGCTGGCG ACCGCAAACC GGAACTGGCA
TTCTCGGATG TTACCCTGCT CCCGGTCATT CCTGATCCGG GCAAGATCCT GTGCATCGGC
GTCAATTATG TCGCTCATCG GGAGGAAACC AAGCGGCCCG AAGTTGGCCA TCCAACCGTC
TTCATTCGCT TTGCCGATAG CCAGATTGGC CATGGCCAGC CGATGATCAA GCCAAGCCAG
TCGGATTGCC TCGATTTCGA AGCCGAGCTT GCTGTGGTGA TCGGGCGCGG TGGACGGGAT
ATCGCCGAGG AAGATGCCAT GCAGCATATT GCCGGTTATT CCTGCTATCA TGACGGTTCG
GTGCGCGACT GGCAGCGCCA TAGTTCACAA TTTGCGCCTG GCAAGAATTT TCCCGCGACT
GGTGCTTTCG GTCCGGCTCT GGTGACGGCG GATGAAATTG AGGACTATAC GCAGCTTTCC
ATCACGGGGC GCCTGAACGG ACAGGTCGTT CAGCAGGCGA CGTTGGCCGA CCTGATCTTC
CCTATTCCCG CGCTGATTGC GTATCTTTCG GCCTTTACAC CCCTGTCGGC AGGTGATGTG
ATCGTCACCG GAACCCCCGG GGGTGTCGGT GAGAGACGCG AGCCGCCCTT GTTCATGAAA
GCGGGCGATG TTTTCGAAGT GGATATTCCT GGTGTTGGTC TGCTCGTCAA CCCGGTGATC
GGCGCGCTTT AA
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| Protein sequence | MKFVSFTRLG RAGFGAVVGG GIVDLTGRLS YDCLTLKQAI LDDLLEIAAD YAGDRKPELA
FSDVTLLPVI PDPGKILCIG VNYVAHREET KRPEVGHPTV FIRFADSQIG HGQPMIKPSQ
SDCLDFEAEL AVVIGRGGRD IAEEDAMQHI AGYSCYHDGS VRDWQRHSSQ FAPGKNFPAT
GAFGPALVTA DEIEDYTQLS ITGRLNGQVV QQATLADLIF PIPALIAYLS AFTPLSAGDV
IVTGTPGGVG ERREPPLFMK AGDVFEVDIP GVGLLVNPVI GAL
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