| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6236 |
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| Symbol | |
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| ID | 7381280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 1229680 |
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| End bp | 1230432 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643649702 |
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| Product | transcriptional regulator GntR family |
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| Protein accession | YP_002547926 |
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| Protein GI | 222107135 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.83701 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGACGG ATGTGCTTGC TTTTGCGAGC CTGCAATCCA GCCGGGGCGG CCCGCTTTAT
ATCAAGTTAA AGACGCTGAT CGAGGATGCC GTCGAAGCTG GACAGCTTAA GCATGGCGAC
GCCCTGCCTG CGGAGCGCGA CATTGCCGAG TCCGCAGGTA TCAGCCGCGT CACGGTACGC
AAGGCAATAG ACGACCTTGT TGCTGAAGGT CTTCTGGTTC GGCGCCGAGG TGCTGGAACC
TTTGTCGTCA AGCCAGTCAA GCGCATGCAG CAACCGCTGA CACGGCTGAC ATCCTTTACC
GAGGATATGG CCCGGCGTGG CATGGTCAGC GGTTCACGTT GGCTGGAGCG CGGCTTGTTC
TTGCCAACCC CGGAAGAAAC CATGGCGCTT GGGCTTTCCG GCACCGCCCG AGTAGCACGG
CTGGTGCGGC TACGCACCGC CAGCGACATG CCGATTGCGC TGGAACGTAC CAATCTGCCG
GATGATCTGC TGCCGGATCC CTCTCGCGTC GAGAACTCTC TCTATGCGGC ACTTGGCAGT
GTCGGGATTA GACCCGTGCG CGCCAATCAA CGCATTTCGG CGGTCATATT GACGGATGAA
GATGCCAAAC TGCTCGGCAT GCCGCCGGGT TCTGCCGCGC TTTCGGTGCA GCGAATCGCC
TATCTGGATA CAGGCCGGGT GATGGAAGTG TCGCGCGCGC TATACCGCAG CGATGCCTAT
GACCTGGTTG CTGAATTGAC CATCGGCTCC TGA
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| Protein sequence | MQTDVLAFAS LQSSRGGPLY IKLKTLIEDA VEAGQLKHGD ALPAERDIAE SAGISRVTVR
KAIDDLVAEG LLVRRRGAGT FVVKPVKRMQ QPLTRLTSFT EDMARRGMVS GSRWLERGLF
LPTPEETMAL GLSGTARVAR LVRLRTASDM PIALERTNLP DDLLPDPSRV ENSLYAALGS
VGIRPVRANQ RISAVILTDE DAKLLGMPPG SAALSVQRIA YLDTGRVMEV SRALYRSDAY
DLVAELTIGS
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