| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6225 |
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| Symbol | dctA |
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| ID | 7381165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 1220089 |
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| End bp | 1221423 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643649694 |
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| Product | C4-dicarboxylate transport protein |
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| Protein accession | YP_002547918 |
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| Protein GI | 222107127 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATATTT CTACCACAAC CGCCCCGCAG GGCGGCAAGC TCCCATTTTA CCGTCATCTG
TATTTCCAGG TTATCGTTGC GATTATCGGC GGTATCTTGC TCGGTCATTT TTACCCACAA
ACTGGCGAAG CTCTCAAACC GCTCGGTGAT GCTTTCATCA AGCTCGTCAA AATGGTCATC
GCGCCTGTTA TCTTCCTGAC CGTGGCCACC GGCATCGCCG GCATGTCCGA CCTGAAGAAG
GTTGGTCGCG TTGCCGGCAA GGCAATGATC TACTTCCTGT GCTTCTCCAC GCTGGCGCTC
GTTGTCGGCA TGCTGGTGTC GAATATCCTG CAGCCCGGCG CAGGCATGCA TATCAATCCC
GCGACGCTGG ATGGCAAGGC TGTTGCCAGC TATGCCCAGC AGGCCCATGA TTCGACGATC
ACCGGCTTCC TGATGAACAT CATCCCCGAC ACGATTGTCG GCGCTTTTGC CAAGGGTGAC
ATTCTCCAGG TCCTATTCTT CTCGGTGCTG TTCGGCTTGG CTCTCGCCAT GGTCGGCGAC
CTTGGAAAGC CGGTCACCAA CTTCTTGCAG GCGTTGACCG CGCCGGTCTT CAAGCTGGTC
GCCATCCTGA TGAAGGCCGC ACCAATCGGC GCTTTCGGCG CAATGGCCTT CACCATAGGT
AAATATGGCA TTGGCTCGAT CGCCAACCTG GCTTTCCTGA TCGGGACATT CTACCTGACG
TCGCTGCTAT TTGTTCTCGT CGTGCTTGGC GGCGTTGCCC GCTATAACGG TTTCTCCATC
CTGGCCCTGA TCCGCTACAT TAAAGAGGAG CTGCTGCTGG TACTGGGGAC CTCGTCTTCA
GAAGCCGCCC TTCCCGGCCT GATGGCCAAG ATGGAACGCG CAGGCTGCAA GCGCTCGGTT
GTCGGCCTGG TCATTCCAAC CGGCTATTCC TTCAACCTTG ACGGTACCAA CATCTACATG
ACCCTGGCGG CCCTGTTCAT CGCCCAGGCG ACGGATATCC AGCTTTCGCT TGGCGACCAG
ATTCTTCTGC TGCTGGTGGC CATGCTCAGC TCCAAGGGTG CCGCAGGCAT CACTGGCGCC
GGCTTTATCA CCTTGGCTGC AACACTGTCC GTTGTCCCTT CGGTCCCGGT CGCTGGCATG
GCGCTGATCC TCGGTATCGA CCGTTTCATG TCAGAATGCC GGGCACTGAC CAATTTCATT
GGCAATGCCG TCGCAACCGT GGTCGTCGCC CGCTGGGAAA ACGAACTCGA TCAGACACAG
TTCCGCGCCG CCATGGCGGG TGAATTGCCG GAAGAAATCG ATGTCGTGGC CGAACCGGTT
CCAACCGCCG CATGA
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| Protein sequence | MHISTTTAPQ GGKLPFYRHL YFQVIVAIIG GILLGHFYPQ TGEALKPLGD AFIKLVKMVI
APVIFLTVAT GIAGMSDLKK VGRVAGKAMI YFLCFSTLAL VVGMLVSNIL QPGAGMHINP
ATLDGKAVAS YAQQAHDSTI TGFLMNIIPD TIVGAFAKGD ILQVLFFSVL FGLALAMVGD
LGKPVTNFLQ ALTAPVFKLV AILMKAAPIG AFGAMAFTIG KYGIGSIANL AFLIGTFYLT
SLLFVLVVLG GVARYNGFSI LALIRYIKEE LLLVLGTSSS EAALPGLMAK MERAGCKRSV
VGLVIPTGYS FNLDGTNIYM TLAALFIAQA TDIQLSLGDQ ILLLLVAMLS SKGAAGITGA
GFITLAATLS VVPSVPVAGM ALILGIDRFM SECRALTNFI GNAVATVVVA RWENELDQTQ
FRAAMAGELP EEIDVVAEPV PTAA
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