| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6182 |
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| Symbol | |
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| ID | 7381238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 1188275 |
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| End bp | 1190017 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643649660 |
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| Product | phage terminase-like protein large subunit |
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| Protein accession | YP_002547884 |
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| Protein GI | 222107093 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4626] Phage terminase-like protein, large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0535933 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGCGC TTTTTCCGCT GGCCATGCCT TACCCCGAAT GGTTGGCAGA TGTCGCCGAC
GATCCGGCGT ATGAGTGGGC GATTTCAGGA TGGAACCGGG CGGCGGCGGT GGCCGGTGCA
TGGTTCGATC ACCGCAAGGC CGATACTGTC GTTGCGCGGT GGCCTGATAT TTTCCGGCTC
ACCAATGACC GGTTCAAGGG CATTCCCTTC CGCCTGGTCA AGTGGCAGGA AATTACCGTC
CGGCTTCTGG TTGGTTGGAA AAAGCCGATT GAGGTTATCG ATCCTCGCAC GCATAAACCG
GCAATCGAGC ATGTGCGGGT GTTCCGTCGC CTCGATCTCT GGATACCGCG CAAGAACGGC
AAGTCTGAAT TTCTGGCGGC GCTGGGTGTT CTGTTCTTTT GCCTGGAGAA GCTGGCCGGG
GCGGAAGGGT ATGTGTTTGC CCGCAACGAA GATCAGGGCC GCGTACCGTT TGAGAAGATG
AAGGATATCA TTCGTGAGGC CAACGGCATC ATGGAAGACG CGCAAGGCAA CGCGCGGATC
GCGATCTTCG ACAAGTCTAT CTATGTGATG GAAACGAATT CGAGCTGCCA GCTCCTGACC
GGGTCGCCGG ACGGAAAGCA TGGCCGCTCT GCTACCGTAA CCGTTGGCGA TGAAATCCAT
GAATGGAAAT CAACGGAACT GGCCGATACG TTGCGGCAAA GCTCCGGCGC CCGGCTCCAG
CCCATCGAAC TTTACGCTTC GACGGCTGGC CGCAAGCAGT CGCTGACCGG TTATGAATGG
TATGAAGAAT CTGTCGCGAT CATGCGCGGC GAAAAGGAAG ATCCGACAAC CCTTGTCATT
CACTTTGCCA TTGGTGAAGA CGACGATTGG ACGGACGAGG AAGTTTGGCG CAAAGCAAAC
CCCAGCCTTG GCCTGACACC GACACTGGAC TTCCTGCGAA CGGAATACAA GAAAGCCAAA
GGGTCACCTC CAAAGGAGGC CCGGTTCCGC TGCTATCACC TCAACCAGTG GGTTGATGAG
ATTTCCGGCT GGCTTTCGCG CTCGGTCTGG GCGGAATGCA CGAAGGATGC GCAGTCCTGG
CGCGATCTCT GGGAAAAGCA CAGGGGCCGT AGCGGCTATC TGTCGTGCGA CGTTTCGGCC
ACGCAGGACT TGACGTCCAT GGTCGTAACG TTGCCACCAG ACGATGACTT TGATGAATGG
GTCCTTATCC CTCTGTTCTG GATACCAGAG GGAACGCTGG ACGAGCGGGC GGCGAAAGAC
CGGCGCGTCA ACTGGAAAAA ATGGGCGGCT GATGAGGTTG TCCTGACGAC GCCCGGCGAT
GCTGTCGATC AGAACTTTGT CTTGAATGCG ATCATCCTGG CAATTGCCCA TTTTCAGATT
TTGAAGATCG GCGTCGATCC ATGGAATGCG CAAAAGCTCC AGGGGGATTT GCAGCGCGAA
GGCGTTGACC CGGAGTTGTT TCAGGAAATG CGCATGGGAC ACCAAACGCT TTCCGGTCCG
ACAAAGGAAT TTGAGCGCCT GGTGCTGGCA CGCAAGATTG AACACGGCGG CCACCCGATA
CTGACTTGGA TGGCCGGTCA TTGCGCCGTC CGGTTTGACG AAAACCTGAA TTACATCCCC
GCGAAAAAGC GCTCTGCCGA CAAGATCGAC GGCATTGTCG CCGCTGTCAT GGGGGTCGGT
TTGGGGATGA ATACAGAAGA TAACAGCTCG GTCTATGACG AGCGCGGTAT TGAGGTGCTT
TGA
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| Protein sequence | MAALFPLAMP YPEWLADVAD DPAYEWAISG WNRAAAVAGA WFDHRKADTV VARWPDIFRL
TNDRFKGIPF RLVKWQEITV RLLVGWKKPI EVIDPRTHKP AIEHVRVFRR LDLWIPRKNG
KSEFLAALGV LFFCLEKLAG AEGYVFARNE DQGRVPFEKM KDIIREANGI MEDAQGNARI
AIFDKSIYVM ETNSSCQLLT GSPDGKHGRS ATVTVGDEIH EWKSTELADT LRQSSGARLQ
PIELYASTAG RKQSLTGYEW YEESVAIMRG EKEDPTTLVI HFAIGEDDDW TDEEVWRKAN
PSLGLTPTLD FLRTEYKKAK GSPPKEARFR CYHLNQWVDE ISGWLSRSVW AECTKDAQSW
RDLWEKHRGR SGYLSCDVSA TQDLTSMVVT LPPDDDFDEW VLIPLFWIPE GTLDERAAKD
RRVNWKKWAA DEVVLTTPGD AVDQNFVLNA IILAIAHFQI LKIGVDPWNA QKLQGDLQRE
GVDPELFQEM RMGHQTLSGP TKEFERLVLA RKIEHGGHPI LTWMAGHCAV RFDENLNYIP
AKKRSADKID GIVAAVMGVG LGMNTEDNSS VYDERGIEVL
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