| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6097 |
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| Symbol | |
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| ID | 7380750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 1118785 |
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| End bp | 1119792 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643649593 |
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| Product | ABC transporter membrane spanning protein (sugar) |
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| Protein accession | YP_002547818 |
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| Protein GI | 222107027 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACG CAACGGATAT CACCATGACG ACTCTGCAAA GCGCGGCAAC TCCTGGCCGT
TTAGACATTC AGGGATTTTT CCTGCGCTAC GGACTGTTCC TTCTCTTAGT ATTGCTCATT
CTGCTATTTG CTTGGCTGCG GCCCAGCTTC GTCAGTGGTG GTAACATCAA TGACATGCTG
CGCTCGGCCA GCATCGCGGC ACTGATGTTT CTAGGGCTGA CCTGGATCAT TGCGGCAGGT
GAAATCGATG TCAGCTTCAT GTCCGTTGCA GCGCTCGCCA ATATGGTCGT GGCAGCGCTG
GTTGCGGCAG GCCAGGGCTG GGCCATGGCC TGTCTTGCTG GCCTGTTGGT TGGTCTTGTC
TTTGGTCTCG TAAACGGATT GCTTGTCGCG ATCTTCAAGC TTCCGGCCCT CGTCATCACC
ATTGCCACGG GCGGGCTGGC CGGATCGATT GCCGCCGCCA TCGGGCTTGG CACATCAATT
TCCCTCTCCT CCACGGGCTT CGTCGGCTCT CTCTTGCATG TCAATTTCGG CATCATCCCG
CTGCTGACGG TGATCGTCGC GCTTCTCTAT GCCGGTGCCT GGTTTATCCA GGAAAGGCTG
ACCTTTGGCC ATTATCTCTA CGCCATGGAA CAGAACCGCG CCGCCGTGAT CGAAACGGGC
GTGCCAGTCA ACCGGTTATT GCTGATGCTC TATGTGCTGT CTGGCCTTGT GTCGGCTCTG
GCGGGTATCC TGCTGACAGC CGATCTCTCG TCCGGTCAGC CCTATATCGG CAGTTCCTAT
TTCATTGACG GCCTGACCTC GGTTCTGCTG GGGGGCATGG CGCTGAAATA CGGCAAACCC
AATGTCATCG GCACCGTCAC CGCCGTTCTC CTACTGGCCA CGCTTTTAAG CGGTGCCGCC
CTACTCGGCT GGACGGATGC GCAACGCCAG ATCGTGCGTG GCCTGCTCCT GCTATGCGGT
GTCGCCACGG TTGTCTGGGC AAGGCGCAAG ACACGCGCCC ACATTTAA
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| Protein sequence | MKNATDITMT TLQSAATPGR LDIQGFFLRY GLFLLLVLLI LLFAWLRPSF VSGGNINDML
RSASIAALMF LGLTWIIAAG EIDVSFMSVA ALANMVVAAL VAAGQGWAMA CLAGLLVGLV
FGLVNGLLVA IFKLPALVIT IATGGLAGSI AAAIGLGTSI SLSSTGFVGS LLHVNFGIIP
LLTVIVALLY AGAWFIQERL TFGHYLYAME QNRAAVIETG VPVNRLLLML YVLSGLVSAL
AGILLTADLS SGQPYIGSSY FIDGLTSVLL GGMALKYGKP NVIGTVTAVL LLATLLSGAA
LLGWTDAQRQ IVRGLLLLCG VATVVWARRK TRAHI
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