| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5938 |
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| Symbol | exoQ |
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| ID | 7381028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 957109 |
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| End bp | 958386 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643649456 |
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| Product | exopolysaccharide production protein |
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| Protein accession | YP_002547687 |
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| Protein GI | 222106896 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGATCG CCAAATCGCA TCTGATCGAC CCGGAACGCA ATGGTCTCTA TGCCGTCACG
GCGATTGCGC TTTCCTATTT CGTTTTTGCC TATTCTGCCC GTTTCGGGCA GATTTCCATT
TTGGCCTATT ACGGGGTCTG GCTGCCGCTG ATTGCTGTGA ATTACCGGCG CGTGCTCGGT
AACTATGGCC TGTATCTTCC GATTTTTGCC TTCAGCATTT TGACGATTCT ATCGATCTTC
TGGTCGGCGG CGCCACCGGT GACAGTCAGG GCCTCGTTGC AATATTTCTC GCATATCGTC
TGTGCGTTGA TTGCCATGCG TGTGGTGGGA ATCCGTTCCT TTCTGAGGGG ATCCATGATC
GGCACTGGAA TCGTGCTGAT TTATTCGCTG TTGTTCGGCT CCTATTTCCT CGATCCACTG
GACGGATCCT TCAGCTTTGT GGGTGCTTTC TCGTCAAAGA ACCAGTTGGG TTTCTATGCC
TCCCTCGGCG TGTATTTTTC GTTCGCTGCG ATCATTATCC TGAAAGAACG CAGCATATGG
ATGCTGCCGC CCGCTGGGCT GGCTTTGCTA TCAGCTTACT GTCTGTTTGC ATCCGAATCG
GCCACATCGG TCATTACCGT CATGGCGGTG GTCGGTGCGT CCCTGGTCTT GAGAGCGGTT
ATTCTTCTGT CGCCGCGCCA TCGGATTGTG CTGGTAGTGG CTGGCGTCGT GCTTGGCGGG
CTTGGCGCGG CTGCGTTCGT TTATGCTGGT GGCGTCGATT TGATCCTGGG AGCGTTCGGA
AAGGATTCGA CCCTGACGGG GCGAACCTAT CTTTGGCAGC AGGGCATAGC GGCGGCCCTG
GCGAATCCGA TTTTTGGCGT CGGTTACCAG GCCTATTGGG TCCAGGGCTT TTCCGAGGCG
GAGCGGCTAT GGGATGAGTT CTACATCCCA ACCCGGGCCG GGTTTCATTT TCACAATACC
TTCATCGAAA CCGCTGTTGA GACGGGGATT ATCGGCCTCG TTCTGCTGGT TGCGATGTTG
GTCGTCGCAT TGATCGGCAA TCTCAAACGT CTGCTCGTCA ATGCCCGAGA TCCAGAGGCC
GGCGTGCTGT TCGGTCTCGC CATGCTGTTG GTCGAGCGGG CTTTCGTGGA AATCGATATT
ATCTTCGCCT ATCAGATCGG CTCATTCCTG CTTTATTTCA TGCTGGGCAA GCTTGTTCAG
CGCCGCGCCA TTCCGGTGAC ACGCTCAAGT GTCGTGCGTT ATTATGGTGA TGGAACCTCG
AGCGCCCGCA ATATCTAA
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| Protein sequence | MRIAKSHLID PERNGLYAVT AIALSYFVFA YSARFGQISI LAYYGVWLPL IAVNYRRVLG
NYGLYLPIFA FSILTILSIF WSAAPPVTVR ASLQYFSHIV CALIAMRVVG IRSFLRGSMI
GTGIVLIYSL LFGSYFLDPL DGSFSFVGAF SSKNQLGFYA SLGVYFSFAA IIILKERSIW
MLPPAGLALL SAYCLFASES ATSVITVMAV VGASLVLRAV ILLSPRHRIV LVVAGVVLGG
LGAAAFVYAG GVDLILGAFG KDSTLTGRTY LWQQGIAAAL ANPIFGVGYQ AYWVQGFSEA
ERLWDEFYIP TRAGFHFHNT FIETAVETGI IGLVLLVAML VVALIGNLKR LLVNARDPEA
GVLFGLAMLL VERAFVEIDI IFAYQIGSFL LYFMLGKLVQ RRAIPVTRSS VVRYYGDGTS
SARNI
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