| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5878 |
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| Symbol | |
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| ID | 7380649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 888762 |
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| End bp | 889529 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643649399 |
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| Product | dehydrogenase |
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| Protein accession | YP_002547636 |
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| Protein GI | 222106845 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.493038 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAACC AGAACCAGCG GATCGTCATC ATAACTGGAG CCGGGATCGG CATCGGCGCT
GCCGCGGCTA AAGCCTTTGG TGCGCTCGGC GATCATGTCG TCGTCACCGA TATTTTGGAC
GCCGAAGGCG AGGCGGTGGC GCAGGCCATT CGCGCTGCTG GCGGCTCGGC AGAGTTTCAT
CATTATGACG TGCGCTCGAC ACCAGCAGCC GATGCGCTGG TCGCCGATAT CGAGGCACGG
CTTGGCCGGA TCGATGTGGT GGTCGCCAAT GCAGGCATTG CGCATCGCGT GCCGCTGAAA
GAGCTGACCG ATGAAAAATG GGACCTGACC TTCGATATTG ATCTCAAGGG TATCTTCCGC
CTCGTGCGGG CGGCTACGCC TGGGATGCGC ACCCGCAAAA GCGGGGCGAT TGTCGCGCTG
TCGTCGATCA TGGGCATCGC CTATGGCTGG GATGAGCATG TGCATTATTC CGCTGCAAAA
TCCGGGGTGA TCGGACTGGT GCGCGGTCTG TCCGTCGAGC TTGCCCGCGA AGGGGTGCGG
GTCAACGGCA TTGCCCCGGG CTATATCCGC ACCGCGCAAT TGCTGTCGGA GGAAAACTCG
CTGGGGCCGG TGGGAGCGGA AAAAGCCGCC GAAATCATCC CGATGGGCCG TCTCGGAACA
CCCGACGATA TTGCCGATGT CATCACTTTC CTTGCCTCCA ATGCGGCTCG CTACATGACC
GGCCAGGTGC TGGTCGTCGA TGGAGGACTG CTGGTTGGGC GCTACTGA
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| Protein sequence | MSNQNQRIVI ITGAGIGIGA AAAKAFGALG DHVVVTDILD AEGEAVAQAI RAAGGSAEFH
HYDVRSTPAA DALVADIEAR LGRIDVVVAN AGIAHRVPLK ELTDEKWDLT FDIDLKGIFR
LVRAATPGMR TRKSGAIVAL SSIMGIAYGW DEHVHYSAAK SGVIGLVRGL SVELAREGVR
VNGIAPGYIR TAQLLSEENS LGPVGAEKAA EIIPMGRLGT PDDIADVITF LASNAARYMT
GQVLVVDGGL LVGRY
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