Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5866 |
Symbol | |
ID | 7380640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | + |
Start bp | 880153 |
End bp | 880395 |
Gene Length | 243 bp |
Protein Length | 80 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643649390 |
Product | hypothetical protein |
Protein accession | YP_002547627 |
Protein GI | 222106836 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0511] Biotin carboxyl carrier protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCACCC ACGAGATCAG ATCGCCCCTG CCTGGCACAT TCTACCGCAA GCCGTCTCCC GATGCCCCGA GCTTCAAAAA TGACGGAGAC GCGGTGGCTG AAGGAGATGT TATCGGCCTG ATTGAGGTGA TGAAGACCTT TCATGAAGTG CATGCGGATG CCTCCGGCAC CGGTCTGGTG TTCGTGGCGG AAGACAATGA GCCGATCATG GCCGGTCAGG TGATCGCGCA GGTGCAGGCA TGA
|
Protein sequence | MSTHEIRSPL PGTFYRKPSP DAPSFKNDGD AVAEGDVIGL IEVMKTFHEV HADASGTGLV FVAEDNEPIM AGQVIAQVQA
|
| |