| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5743 |
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| Symbol | |
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| ID | 7381624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 770519 |
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| End bp | 771049 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643649296 |
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| Product | hypothetical protein |
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| Protein accession | YP_002547533 |
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| Protein GI | 222106742 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4583] Sarcosine oxidase gamma subunit |
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| TIGRFAM ID | [TIGR01375] sarcosine oxidase, gamma subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0936885 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGAGA ACGCCCTGCC TGACTCTGTC CTGGCCGATT TCCACCTTGT TCGCCGTCCA
GCACTCGCCA CCAAGGCGGT GGAGCGGTTT GGTGTGCTAA CGCTGGAAAC CGTGTTCGAC
GCAACCATTC TGCATGTGCT GGGCAAGCCT GGCGATGTTG CACCAATGCC ACCGCAAGGC
TTTGATCTGC GCAATGCCGG ACCCGGCCAA TGGTTTGCCG TCGGACATGC AAGTGCCGAT
CACGCTGCGG CTACCTTTGG CCCAACCGCC TTTCTTGTCG ATCAAAGCCA TGGCCGCACA
CTGATCCGCA TCAGTGGCGC GCCAGTGCGC AACGTTCTGG CAAAAGGCAC CGCGCTTGAT
CTTCACCCCG ATCAATTCGC AATCGGTAGT GCTACGACGA CGTTGATCGG CCACATCTCC
GTCAATCTCT GCCGTACGGG TGAGGACCAG TTCGAGCTTC TGGTGTTGCG CGGCTTTGCT
GAGAGCCTCT GGGACGAGCT TGCGGGGATG GCGCGGGAGT TTCAAGAATA G
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| Protein sequence | MSENALPDSV LADFHLVRRP ALATKAVERF GVLTLETVFD ATILHVLGKP GDVAPMPPQG
FDLRNAGPGQ WFAVGHASAD HAAATFGPTA FLVDQSHGRT LIRISGAPVR NVLAKGTALD
LHPDQFAIGS ATTTLIGHIS VNLCRTGEDQ FELLVLRGFA ESLWDELAGM AREFQE
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