| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5727 |
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| Symbol | mdeA |
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| ID | 7381609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 748920 |
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| End bp | 750107 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643649281 |
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| Product | hypothetical protein |
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| Protein accession | YP_002547518 |
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| Protein GI | 222106727 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0500191 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGAGA CACCCAGATT CGACCCTGCC GCGAAAACCA TTCCGGTTCC GCCTCCTGCC
GGTTTTACCG GTCACGACCC CTTCGATGCC GCCGTGCCGC CGATCTATCA GACATCGCTG
TTTCTGTTCG ACAGCTATGC CGAGTTGGAA GATGTGTTTG CCGGGCGCTC CCACAAGCCA
ATCTATTCAC GTGGCGATAA TCCAACCGTC CAGATCCTCG AGCACCGGAT CGCCGAAATG
GAAGGCGCGG AGGCCGCGCG GGCGTTTTCC AGCGGCATGG GCGCGATTGC CGCGACCATT
CTCGCCTTCG TCAATTCAGG CGACCGGATT GTCACGGTCC GGCATGTCTA TAGCGATGCG
TTCCGGTTTT TCGAAAAAGT GCTGAAGCGC TTCGGCGTTC TCGTCGATTA TATCGATGGC
ACGGATACCG AAAGCCTGAT TGCCGCCCTG CCGGGCGCAA AAATTGCCTA TCTCGAAAGC
CCGACCTCGA TGGTGTTCGA GCTTCAGGAT CTGGTCGCGG TTGGCGCTGC GGCGCGCCGT
CATGGCGTCT TGACCATTGT CGATAATTCC TGGGCAACAC CGCTCTATCA GAAACCAATT
GCCGCAGGCA TCGATCTTGT CATCCATGCC GCTTCGAAAT ATCTGGGCGG CCAAAGCGAT
ACCGTCGCCG GTCTCGTCAC CGGATCGAAG GAACACATCG CCCGGATCAA CGGCGAAATC
TTTCCCTATA CCGGCGCCAA GCTTTCACCT TTCGAGGCCT GGCTGGTATT GCGCAATCTG
GAAACACTCC CTTTCCGCAT GCGCCATCAC CATGAGGCAG GTCTCGAAGT CGCACACTGG
CTGAAAGCCA GCCAAGCCGT AGGACGGGTC ATGCACCCGG TCTTCAGCGA CCATCCAGGC
CGCACCACAT TGACAGGCTT TGGCGGATTG TTTTCCTTCG AAGTCACCGA TGACATCGAT
GTCGCGACTT TTGTCGATGC CTTGCAACTG GTTCGGATCG GGGTCAGCTG GGGTGGGCCG
GAAAGCCTTG TCGTTCCCGC CAAGGCGGCA CTCAGCATTT CGCCGGAAAC CAATGTCTTT
GCCCGTTTCG GCGTCAGTGA TCGAACCATC CGCCTCAATG TCGGACTGCA TGAGGCAAAG
GCGATCATTG CCGATCTGGA TCAGGCGCTC GCGCAAGCCG CACGGTAA
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| Protein sequence | MNETPRFDPA AKTIPVPPPA GFTGHDPFDA AVPPIYQTSL FLFDSYAELE DVFAGRSHKP
IYSRGDNPTV QILEHRIAEM EGAEAARAFS SGMGAIAATI LAFVNSGDRI VTVRHVYSDA
FRFFEKVLKR FGVLVDYIDG TDTESLIAAL PGAKIAYLES PTSMVFELQD LVAVGAAARR
HGVLTIVDNS WATPLYQKPI AAGIDLVIHA ASKYLGGQSD TVAGLVTGSK EHIARINGEI
FPYTGAKLSP FEAWLVLRNL ETLPFRMRHH HEAGLEVAHW LKASQAVGRV MHPVFSDHPG
RTTLTGFGGL FSFEVTDDID VATFVDALQL VRIGVSWGGP ESLVVPAKAA LSISPETNVF
ARFGVSDRTI RLNVGLHEAK AIIADLDQAL AQAAR
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