| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5657 |
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| Symbol | |
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| ID | 7381129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 681179 |
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| End bp | 682357 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643649223 |
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| Product | ABC transporter membrane spanning protein (sugar) |
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| Protein accession | YP_002547460 |
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| Protein GI | 222106669 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4603] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.348277 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGGCGC GGGCCATGAC CACGACACCT GAGAGCCGGA CACCCCAGCC GCATGGCTTG
CAACCCAAGT CTGCGGGGCG TCACGCGCTG CGTCCGGTGG TGGAATGGCT GGCCCGCCGC
GCCGAGCCGG TGGCCATCAC TTTGCTGGCC GTGCTGATGG GGCTTGGCCT GTTCAGCCTG
TTCATTATCG CCATCGGCAA ATCGCCGCTG CAACTGTTCC AGCTGATGTT TGCGGGCGGC
TTCGGCTCGT GGTTTTCACT GCAAAATGCC CTTAGCCGGG CAGCCCCGCT GCTGCTGACC
GCACTCTGCG TGGCACTTCC GGCGCGCCTC GGACTGACAA TCATTGGCGC GGAGGGCGCG
CTGGTGCTGG GCGGCCTGGC GGCGGCGGCC ATCGCCGTTC CGCTGGCTCC GGGCTTTAGT
CCCCCTGCTC TTTGGCTGAT CATGGGGCTT TGCGCCATGC TGGCGGGCGG TGTGTGGATC
GGCTTTGCCG GAGCGCTGAA ACATTATCGC GGCGTCAATG AAACCATATC CTCGCTGCTG
CTGGCCTATA TCGCCATCGC GCTGATGAAC CACCTGATCG AAGGGCCGCT GCGCGATCCG
GCCAGCCTCA ACAAGCCCTC GACCCTGCCC CTGCCCGCCG CCGACATGAT CGGCAAAATC
CCCGGCATGG ACGTGCATTG GGGCCTGGCC GTCGGCGTCA TCGCCTGCAT TCTCTCCTAT
ATCGTGATCG AATGGACCAG CATCGGTTTT GCGGCCCGGA TCGCGGGCGG CAATATGCGC
GCCGCCCAGA TCCAGGGGCT TCCGGTTGGG CGGTTGATCG TCGGCTTCAC CGCGCTGGCC
GGTGGTTTTG CAGGCCTTGC CGGGATGATC GAAGTTGCCG CCGTGCAAGG CAGCGCCAAT
GGTGCGCTGG TGGCTGGCTA TGGCTATACC GGCATTCTCG TCGCCTTCCT CGCCCGGCAA
AATCCGCTGG CGATCATTCC CGTCGCGATC TTCCTCGGCG GCATCACCGC GTCCGGCGGC
TTGATCCAGC GCCGCATGGG TCTGCCGGAT GCCACCGTGC TGGTGCTTCA AGGCACGCTG
TTCGTGGTCA TCCTGTTTTG CGAAACGCTG TATGGCCGGT TCCGCGTCTT TAATCCTGAG
CTTTGGAAAC AGCCGGACGC CGCGAAAGGA GCCCAATGA
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| Protein sequence | MEARAMTTTP ESRTPQPHGL QPKSAGRHAL RPVVEWLARR AEPVAITLLA VLMGLGLFSL
FIIAIGKSPL QLFQLMFAGG FGSWFSLQNA LSRAAPLLLT ALCVALPARL GLTIIGAEGA
LVLGGLAAAA IAVPLAPGFS PPALWLIMGL CAMLAGGVWI GFAGALKHYR GVNETISSLL
LAYIAIALMN HLIEGPLRDP ASLNKPSTLP LPAADMIGKI PGMDVHWGLA VGVIACILSY
IVIEWTSIGF AARIAGGNMR AAQIQGLPVG RLIVGFTALA GGFAGLAGMI EVAAVQGSAN
GALVAGYGYT GILVAFLARQ NPLAIIPVAI FLGGITASGG LIQRRMGLPD ATVLVLQGTL
FVVILFCETL YGRFRVFNPE LWKQPDAAKG AQ
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