| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5641 |
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| Symbol | |
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| ID | 7381115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 666247 |
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| End bp | 667773 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643649209 |
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| Product | ABC transporter substrate binding protein (oligopeptide) |
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| Protein accession | YP_002547446 |
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| Protein GI | 222106655 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.543478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTCATG CACGCTTTTT CAAGCCGGGC ACTTTGCGTC GCATCGCGTT GATGACGCTG
GCGGCGACGA CGGTGTCGCT TGTCGGTCCC GGCCTGGCGA CGGCGGCCCA AAGGACGTTG
ACACTCGGCA TGAATATCGA GCCGACTGGG CTTGATCCGA CGGTGGCAGC CCCTGTGGCC
ATCGGCCAGG TGACCTGGCA GAATATTTTC GAAGGGCTGG TTGCCATCGA CCGTGACGGC
AAGATCGTGC CGCAGCTGGC GAAAAGCTGG GAGATCTCCC CCGACGGCCT CACCTATACA
TTCAAGCTCC AGGAGGGTGT GACCTTCCAC GATGGTGAGG CGTTTGATTC CTCCGTGGCG
AAATTCACGC TCGACCGGGC GCGAGGCCCA GACTCGACCA ATGGCCAGAA ACGGTTTTTT
AGTGCCATCG ACAGCATCGA GACACCGGAC AAGGCAACGC TAGTCTTGAA ACTGAAGGAA
CCAGCGGGCT CGCTGCTCTA CTGGCTGGGC TGGCCCGCCT CGGTGATGGT GGCGCCGAAA
ACTGCTGCTG ATGACAAGAC CAATCCCATC GGCACAGGCC CGTTCAAATT CGTCAGCTGG
ACCAAGGGCG ACCGGGTGGA GCTTGCCGCC AACCCTGATT ACTGGAACAA GCAGGTGAAG
CTTGGCCTCG ACAAGGTGGT GTTCCGCTTC ATTCCCGATG CTCAGGCCCA GGCGGCGGCG
CTGAAATCCG GCGGCGTCGA TGCCTTTCCA GAGTTCAGCG CGCCGGAACT GATGGACAGT
TTCAAGGACG ACGCCAAGCT TGCGACTGTG GTCGGCAATA CCGAGTTGAA GGTCGTGGCG
GGCATGAACA ACACCCGCAA GCCGTTCAAC GACAAGCGTG TGCGCCAGGC GCTGATGATG
GCGATTGATC GCTCGACGCT GGTGGAAGGC GCCTGGTCCG GCTATGGCAC TGTGATCGGC
AGCCATTATA CGCCGAACGA TCCGGGCTAT ATCGATACCA CCAAGGTCCT GCCCTATAAC
CCGGAAAAGG CCAAGGAGCT TCTGGAGGAG GCTGGCTATC CAAACGGGTT CAGCTTCACC
ATCAAGACCC CGCAAATGAC CTATGCGCCG CGCAGCGCCG AAATCATGCA GGCCATGCTG
GCTGAAATTG GCGTGACGAT GACGATAGAG CCCACCGAGT TTCCGGGAAA ATGGGTGTCG
GACGTGTTCA AGGGTACGGA TTATGACATG ACCATCGTTG CTCACGCCGA GCCAATGGAT
ATCGATATCT ATGCCCGCGA CCCCTATTAT TTCAACTATA AGAACCCGGT CTTCAACGAG
ACGATCAAGA AGATCCAGGC CACATCCGAT CCGGCGGCCC AGGCCACGCT CTACGGTCAG
GCGCAACAGA TCCTGGCGGA GGACGTACCC GCCCTCTATC TGTTCGTCAT GCCGAAGCTT
GGCGTGTGGA ACAAGAAAAT CAAGGGCTTG TGGGAAAACG AACCGATCCC AGCCAATGTT
TTGTCACAGG TGTATTGGGA GGATTGA
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| Protein sequence | MVHARFFKPG TLRRIALMTL AATTVSLVGP GLATAAQRTL TLGMNIEPTG LDPTVAAPVA
IGQVTWQNIF EGLVAIDRDG KIVPQLAKSW EISPDGLTYT FKLQEGVTFH DGEAFDSSVA
KFTLDRARGP DSTNGQKRFF SAIDSIETPD KATLVLKLKE PAGSLLYWLG WPASVMVAPK
TAADDKTNPI GTGPFKFVSW TKGDRVELAA NPDYWNKQVK LGLDKVVFRF IPDAQAQAAA
LKSGGVDAFP EFSAPELMDS FKDDAKLATV VGNTELKVVA GMNNTRKPFN DKRVRQALMM
AIDRSTLVEG AWSGYGTVIG SHYTPNDPGY IDTTKVLPYN PEKAKELLEE AGYPNGFSFT
IKTPQMTYAP RSAEIMQAML AEIGVTMTIE PTEFPGKWVS DVFKGTDYDM TIVAHAEPMD
IDIYARDPYY FNYKNPVFNE TIKKIQATSD PAAQATLYGQ AQQILAEDVP ALYLFVMPKL
GVWNKKIKGL WENEPIPANV LSQVYWED
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