| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5633 |
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| Symbol | dppC |
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| ID | 7381109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 659203 |
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| End bp | 660255 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643649203 |
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| Product | ABC transporter membrane spanning protein (dipeptide) |
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| Protein accession | YP_002547440 |
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| Protein GI | 222106649 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.261705 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGATG TGTCGGAAGG CATGGCCAGC CGTGCCCAAT CCAATCGAGA GCCTGAATCG
CAGCCCCGCA AAAAAGCGGG TGGTGCCAGC CCGTGGCACC GTGCCTGGCG GCTACTCCGA
AGAGATAAAT CGGCCATTGC AGCCGCCATG GTGCTGCTGA TCATCATCGC CTCCAGTCTC
GCCGCCCCGC TCTATGCCTC GATGGTATCA GGCACCGACC CGTTCCGCTC CAACCTTAGC
GGCAGAGTGA CAATCGACGG TCAGCGGGTG AAGGTCATGC AGGCGTCTAC CGAAGGCCTT
GGCCTTGGCG TTACCCCCAT CGGGCCAACC CTCAAAGGAC CGTATTTTCT GGGTGCCGAT
AGCCAGGGCC GCGATATTGC TGCCCGCCTG CTCTATGGCG GACGCAATTC GCTGCTGATA
TCCGCGTCCT CGACCCTGAT CTGTCTGGTG CTGGCCGCAA TCGTCGGGAT TTCGGCTGGC
TTCTTCGGCG GCGTCACCGA TATGGTTCTG TCGCGCATTC TCGACATTCT CTGGGCCTTC
CCGGTCTATC TTCTGGCGAT TTCGCTGTCC ATCGTGCTGA TTTCGCAAGG CATTACCATC
GGCCCCATCG AGATCAATTC CAGCAGCCTG CTGCTGCCCA TCGGCATTAT CGGCATTATC
TACGTGCCTT ACGTGGCGCG TCCGGTGCGC GGGCGGGTGC TTTCGCTCAA AAACAGCGAA
TTCGTGTTGG CCGCCATCGG CCTTGGCATT CCCAAATGGC GCATCCTGAT CAAGGACATC
TTGCCGAATG TCTCGACCAC GTTGATCGTC TTCATTCCAC TGATGATGGC GCTGAACATT
ATCACCGAAT CCTCGCTGTC CTTCCTCTCC ATCGGTGTGC AGGCCCCGGA TGCCAGCTGG
GGAACAATCA TCCAGGATGG ACAGGGCCTG CTTTACACCC GCCCGCTGGT AGCCCTGGCG
CCGGGCATTG CCATCGTGCT CTGCGTGCTG GCGCTCAACG TGCTGGGTGA CAGTGTGCGT
GATGCGCTCG ATCCGCGCAC CAAAGTGATT TGA
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| Protein sequence | MNDVSEGMAS RAQSNREPES QPRKKAGGAS PWHRAWRLLR RDKSAIAAAM VLLIIIASSL
AAPLYASMVS GTDPFRSNLS GRVTIDGQRV KVMQASTEGL GLGVTPIGPT LKGPYFLGAD
SQGRDIAARL LYGGRNSLLI SASSTLICLV LAAIVGISAG FFGGVTDMVL SRILDILWAF
PVYLLAISLS IVLISQGITI GPIEINSSSL LLPIGIIGII YVPYVARPVR GRVLSLKNSE
FVLAAIGLGI PKWRILIKDI LPNVSTTLIV FIPLMMALNI ITESSLSFLS IGVQAPDASW
GTIIQDGQGL LYTRPLVALA PGIAIVLCVL ALNVLGDSVR DALDPRTKVI
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