| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5612 |
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| Symbol | |
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| ID | 7381092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 627479 |
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| End bp | 628369 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643649186 |
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| Product | spermidine/putrescine ABC transporter permease protein |
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| Protein accession | YP_002547423 |
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| Protein GI | 222106632 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCGA CCAGTTCGCT GTCGCTTGAT AAAGGGCGGG AGGCAAAAGC TGGACGCGGG
CTGACTGGCC TGCTTCTGGT CGCCCTTCCT ATCCTGCTCT TGGGATGGCT AATCATTTAT
CCGATCATCT CGGCGGTGAT CGGCACACTT GTCGTGGCCT CGCCCGAGGG CGGGTGGCAC
GTTTCAACGG CGTCCTACCG GTTCTTCTTC AGTGACACCT ACAGCCTGCG CAATCTCGGC
ATCACGCTCT GGACCACCGC CGTCTGTGGC GTTGTGCTGC TGCTGATCGG CGTGCCGATT
GCGCTCTACC TGCGCTTTTC CTCCAGCAGG CTGGCCGCTT ATGTTCAGGC GCTGGCGATC
TTTCCGATGT TCGTGCCGTC GATCATCCTC TCCTATGCGC TGATCCGCAC CATCGGTCCA
AATGGCACGG TCGATATCCT GCTCCACGCC GTAGGCCTGC CGAAGCTGCC AACGCCCTAT
CTGACACCCT GGGGTCCCGT GATCGGTCTG GTCTGGGACA ATTTGCCTTT GACCGTGCTG
ATGCTGACGG CGGGTCTCAG CGCCATTTCC AACAATGCCG TCGAGGCGGC GCGCGACGCT
GGTGCAAGGC CTGTGCAGGT ATTTTTGCAT ATCATCCTGC CGCGCATGGC CAATTCCTTC
CTGGTCGCCA GTTCCTTTGC CATTCTCGGA ATATTTTCGG CCTTTACCCT GCCCTATCTG
CTCGGCCCAG CCTCGCCAGA AATGATGGGG CCTTTCATGC AGCGAACGTT TGCCGATCTG
AACGATCCGC TGAATGCCAC CACGCAAGCG GTGATCAGCT TCGGCTTTTG CCTGTTTTTC
GGCGCGTTCT ATGTCTATTC GATTGCCAGA AATCAGGAAC GAACACGATG A
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| Protein sequence | MSATSSLSLD KGREAKAGRG LTGLLLVALP ILLLGWLIIY PIISAVIGTL VVASPEGGWH
VSTASYRFFF SDTYSLRNLG ITLWTTAVCG VVLLLIGVPI ALYLRFSSSR LAAYVQALAI
FPMFVPSIIL SYALIRTIGP NGTVDILLHA VGLPKLPTPY LTPWGPVIGL VWDNLPLTVL
MLTAGLSAIS NNAVEAARDA GARPVQVFLH IILPRMANSF LVASSFAILG IFSAFTLPYL
LGPASPEMMG PFMQRTFADL NDPLNATTQA VISFGFCLFF GAFYVYSIAR NQERTR
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