| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5571 |
|---|
| Symbol | thuA |
|---|
| ID | 7381479 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011988 |
|---|
| Strand | - |
|---|
| Start bp | 583299 |
|---|
| End bp | 584084 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643649151 |
|---|
| Product | trehalose utilization-related protein |
|---|
| Protein accession | YP_002547388 |
|---|
| Protein GI | 222106597 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4813] Trehalose utilization protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.972034 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGATCA AGACGGTTGT CTGGGGTGAG AATATTCATG AGCACCTCAA TGAAGTGGTG
GGAAATCTTT ATCCGGAAGG CATGCATACA GCCATTGCCA AGGCTTTGAA CCGCGACAGC
GACATTGAGG CCACGACCGC AACCTTGCAG GAGCCGGAGC ATGGCCTGAG CACTGAGCGC
CTGGAGCAGA CCGACGTGCT GATCTGGTGG GGCCACAAGG ATCATGGCAG CGTCCGCGAC
GAGATCGTTG AGAGGGTTGT CGCCCGCGTC CATGAGGGCA TGGGACTGAT CGTCCTGCAT
TCCGGGCATT TCGCCAAGCC GTTCAAGCGG CTGATGGGCA CGCCCTGCGC CTTGAAATGG
CGTGAAGCCG GTGAGCGCGA GCGGGTCTGG ACGGTCAATC CCGGCCATCC GATTGCGGCT
GGCATACCCG AACAATTCGT GCTGGAAAAC GAGGAAATGT ACGGCGAGTT CTTTTCCGTG
CCGGAGCCTT TGGAAACCGT GTTCATCTCC TGGTTTTCCG GCGGCGAGAT TTTTCGCTCC
GGCCTCACCT GGCGGCGCGG CGCTGGCAAT ATCTTCTACT TCCGTCCAGG CCACGAAACC
TACCCGACCT ATCATAACGA AACGATACAA CAGGTGATCT CCAACGCGGT GAAATGGGCG
TATAATCCGC GCCCGGCGCT GAAGAGCATT CATGACGCCC CGAATGTGCC GGTCGATCAG
GCGCTCGAGC CGATCCAGGA ACGGGGTCCG AAATTGCATA AGGCCGGGGA GGCCGGATAT
CGATGA
|
|---|
| Protein sequence | MTIKTVVWGE NIHEHLNEVV GNLYPEGMHT AIAKALNRDS DIEATTATLQ EPEHGLSTER
LEQTDVLIWW GHKDHGSVRD EIVERVVARV HEGMGLIVLH SGHFAKPFKR LMGTPCALKW
REAGERERVW TVNPGHPIAA GIPEQFVLEN EEMYGEFFSV PEPLETVFIS WFSGGEIFRS
GLTWRRGAGN IFYFRPGHET YPTYHNETIQ QVISNAVKWA YNPRPALKSI HDAPNVPVDQ
ALEPIQERGP KLHKAGEAGY R
|
|---|
| |