| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5568 |
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| Symbol | |
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| ID | 7381476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 580017 |
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| End bp | 581042 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643649148 |
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| Product | hypothetical protein |
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| Protein accession | YP_002547385 |
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| Protein GI | 222106594 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACAGC CGCTTGAGCC GCAGAAACTC GGCTATCGCT CCCATAAAGT CTTCGCTGTC
GCCCCGATGA TTGACTGGAC GGACACGTTC TGCCGGCGGT TTCATCGTTT GCTGACCCGC
CATGCGCTGC TCTATACGGA AATGATCGTT GCCGATGCCA TTCTTCATGG CAAGCGGGAT
CGCCTGCTGG CTTTCGACGC CAGCGAGCAC CCGTTGGCAC TGCAACTTGG CGGTTCCGAT
CCGCATAAGC TGGCGGAAGC CGTGCGGATT GCCAATGACT GGGGCTATGA CGAAATCAAC
CTGAATGTTG GCTGTCCATC GGACCGGGTC CAGGCCGGAA CCTTCGGTGC CTGCCTGATG
CGCGAACCGC AAACCGTCGA GGCCTGTATC CAGGCGATGA AAGCGGCTTC CACCGTTCCC
GTCACCGTCA AATGCCGGAT CGGCGTCGAC GACCAGGAAC CGGGTGACGT TCTGCCGGAT
TTCATCAAGC GGATGATCGG CGCTGGGGCG GACGCCCTGT GGATTCATGC ACGCAAGGCC
TGGCTACAGG GCCTCAGCCC CAAGGAAAAC AGAGACATTC CGCCGTTGGA TTACCCATTG
GTTCACCTGA TGAAGCAGGA AAACCCGGAT ATTTTTATCG GGATCAATGG CGGCGTTACC
GATCTGGATC AGGCCAGCGC GCATTTGCAG GTCATGGATG GTGTTATGGT CGGCCGTGCC
GCCTATAACA ATGCCACGAT GCTGACCGAA GTCGATGCTC GCATTTATGG CGAACCACTT
CAGGCTCAAA ACATGGACAT CGTTCGTGAT AAGATGATGG ATTACGCCGC CCGCCATATC
GCTGAGGGCG GACGTCTAGT GCATCTGACC CGCCATATGG TCGGGCTGTT TCAGGGCTAT
GCCGGGGCGC GGCGCTTTCG CCAGATCCTT TCGGCTGACG CACCCAAACC GGGGGCTGGA
CCTGATGTCA TCGCGGCGGC ATTCGCTGCG GTGGATATCG ATGCTGGGCC TGTGCGGGCC
GCCTGA
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| Protein sequence | MQQPLEPQKL GYRSHKVFAV APMIDWTDTF CRRFHRLLTR HALLYTEMIV ADAILHGKRD
RLLAFDASEH PLALQLGGSD PHKLAEAVRI ANDWGYDEIN LNVGCPSDRV QAGTFGACLM
REPQTVEACI QAMKAASTVP VTVKCRIGVD DQEPGDVLPD FIKRMIGAGA DALWIHARKA
WLQGLSPKEN RDIPPLDYPL VHLMKQENPD IFIGINGGVT DLDQASAHLQ VMDGVMVGRA
AYNNATMLTE VDARIYGEPL QAQNMDIVRD KMMDYAARHI AEGGRLVHLT RHMVGLFQGY
AGARRFRQIL SADAPKPGAG PDVIAAAFAA VDIDAGPVRA A
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