| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5533 |
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| Symbol | |
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| ID | 7381446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 526924 |
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| End bp | 527754 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643649118 |
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| Product | hypothetical protein |
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| Protein accession | YP_002547355 |
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| Protein GI | 222106564 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3713] Outer membrane protein V |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.20856 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTTTGT CTCGCATCGC AAATCCTAAA GCTGCTGTGG TTGTCGGCTG TCTGTCAGGC
ATGCTGTTTT CTGCCTGTAG CAGTCACGCC GCCGACACGA GTGCCGATAC GGACAACCGC
TGGACAGTCA CGCTTGGAGG CGCGGTCGAA CTGGCGCCCA GCTATCCCGG TTCCAAGCAA
TATACGTTCG GGGTCATTCC CTCCTTCGAT ATCCGTCGGT TCGGAGAGCC CGAGGAAAAT
TCAGCACCTG ATGATAATCT GGATTATACG GTGTTCAGTG GGCATGGGCT TGAAGTGGGG
CCGGTCGTTG GCTTTCGTGA CAGCCGCTCC TCCAAATCGA CCAATCTCGA CGGGCTGAAA
AACGTCGAAT TTGATATCGA TGCCGGTGTC TTCGTCCAAT ACTGGATCAA GCCGGATGTC
TGGCGTGTCC GCTCGGAAAT CCGTCAGGCG CTGTCAAATG GCAGTGGATT GGTGGTGGAT
ATCGGCTCGG ACTGGTTTCA GCCGCTTTCG GAAAAATGGC TGCTGTCCGC CGGGCCGAGG
GCCACCTTTG GTGACACATC CTATATGAAC AAATATTTCG GCGTCTCTGC CACCGAGGCC
AGCCGCAATG GCCGCATCGA TGCTTTCGAT GCGAGCGCCG GGATCAAATC CGTGGGCTTT
ACCGTCTCGG CCACTTATAC GATTTCGCCA GATATGTCGG TGCAACTCTA TAATCGCTTC
GAGCGGCTGG TGGGCGATGC CGCAGATTCT CCTGTTACCT CAGAGCTCGG GACCAGAAAC
CAGAACACTG TTGGAATTGC CTTCAACAAA TCCTTCGATA TTTCATTCTG A
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| Protein sequence | MVLSRIANPK AAVVVGCLSG MLFSACSSHA ADTSADTDNR WTVTLGGAVE LAPSYPGSKQ
YTFGVIPSFD IRRFGEPEEN SAPDDNLDYT VFSGHGLEVG PVVGFRDSRS SKSTNLDGLK
NVEFDIDAGV FVQYWIKPDV WRVRSEIRQA LSNGSGLVVD IGSDWFQPLS EKWLLSAGPR
ATFGDTSYMN KYFGVSATEA SRNGRIDAFD ASAGIKSVGF TVSATYTISP DMSVQLYNRF
ERLVGDAADS PVTSELGTRN QNTVGIAFNK SFDISF
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