| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5481 |
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| Symbol | |
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| ID | 7381566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 476348 |
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| End bp | 477259 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643649073 |
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| Product | transcriptional regulator LysR family |
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| Protein accession | YP_002547310 |
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| Protein GI | 222106519 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0288918 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCAGC TCTCGGCAAT GCGCGCCTTT ATTCGCGTGG TGGAAACCGG CAACTTTACC
CGTGCGGCTG AACGGCTTGA TATGCCGAAG GCAACGGTCA CCAATCTCAT CCAGGGGTTG
GAAGCCCATT TGCAAACCAA ACTGCTCAAC CGGACCACCC GTCGCGTCAT GGTGACCACG
GACGGGGCCT TGTATTATGA GCGAGCCGTC CAGATCGTTT CGGAACTGGC TGAGCTGGAC
GAAAGTCTTT CCAATGCGCA AAGCACACCC CGCGGACGCT TGCGTGTCGA AATGTCCGGC
GCCTTTTCCG ACTGGATTGT CGTGCCGTCC CTCTGCGACT TTCATCAGAA ATTTCCAGAT
ATGCACATCG ATCTCGGCGT CAGCGACCGG ATGGTCGATT ATCTTGCCGA AAACGTCGAT
TGCGCCTTGC GGGCCGGCAC GCCGTCCGAT CAGTCGCTGA TCGCCAGACG GGTTTGCGAC
GTGGAAATGA TCACCTGCGT CGCACCCCGA TATATCGAAA AATTCGGCAT CCCGGCCCAT
CCGCGCGAGC TGGAAAACCA CCACTATTGC GTGAACTATT TCAGCAGCAA CAATAGCCGG
AAAATGCCGT TCACGTTCAA AAAAGACAAG GAAGAGTTGG AGATCAGCGC CCGCTACATC
GTGTCTGTCA ACGATAGCCG CACCTATATG ACGTGCGCCC AGAACGGCCT CGGTATTGCG
CCAATTCCCC GATTCATGGC TGCCAGCCTC CTCGCATCGG GCGAATTGGT GCAAGTGCTG
GCGGAGTGGA GGCGTGAGCC GCTTCCTCTC TATATCGTCT ATCCGCCGAA CCGGCATTTG
AGCAACAAGG TCCGGGTTTT CGTGGATTGG CTGGTAAAAC TTCTGCTCGA AGCCAGACTC
AATGAGGGCT GA
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| Protein sequence | MDQLSAMRAF IRVVETGNFT RAAERLDMPK ATVTNLIQGL EAHLQTKLLN RTTRRVMVTT
DGALYYERAV QIVSELAELD ESLSNAQSTP RGRLRVEMSG AFSDWIVVPS LCDFHQKFPD
MHIDLGVSDR MVDYLAENVD CALRAGTPSD QSLIARRVCD VEMITCVAPR YIEKFGIPAH
PRELENHHYC VNYFSSNNSR KMPFTFKKDK EELEISARYI VSVNDSRTYM TCAQNGLGIA
PIPRFMAASL LASGELVQVL AEWRREPLPL YIVYPPNRHL SNKVRVFVDW LVKLLLEARL
NEG
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