| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5468 |
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| Symbol | |
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| ID | 7381559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 468670 |
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| End bp | 469524 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643649066 |
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| Product | ABC transporter membrane spanning protein (aliphatic sulphonate) |
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| Protein accession | YP_002547303 |
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| Protein GI | 222106512 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.165676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGAATT CAAACCTCAG ACCAGATGCC GGACATGCCC CCTCGCTGGC CCCCTCGCTG
GGACTTGCAT GGTTCAGGGC TGGCCTGTCG CGGTTGGCTG GCAACAGCAT CGGCTGGGCG
CTGCCTTTGC TGATCCTGAT TGCCTGGGAA GCATCGTCGC GCGCCGGATT GTTGCAGCAA
AACGTGCTGC CAGCACCGTC TGCCGTCGCC GAAGCCTTCT GGCGGCTGAC ATTATCGGGC
GAATTGCCAA CCAATATAGG CGTCAGCACC GTACGGGCGT TGGCTGGCTT TGCCATTGGT
GGCGGCATTG GTTTCGCACT CGGTCTGCTC AACGGCCTGT CGGCCCTGAG CCGGGGCATT
ACCGATACAA CCTTGCAGAT GGTGCGCAAT ATTCCCCATC TGGCACTGAT CCCGCTGGTT
ATTCTGTGGT TCGGGATTGA TGAGGAGGCC AAGCTCTTTC TTGTCGCGCT TGGCGTGTTT
TTCCCGATCT ATGTCAACAC CTTGCTGGGT ATCCAGAGCG TCGATCCGCA ACTGGTGGAA
ATGGGCCGCC TTTACGGCAT GAAGCCATAC CGGCTGTTTC GCAAGGTGAT CTTGCCGGGC
GCCCTGCCCG CGATCTTTGC CGGACTGCGC TATGGTCTTG GCATCATGTG GCTGACGCTG
ATCGTCGCGG AAACCATCGC CGCCTCTTCC GGCCTCGGTT ACATGGCCAT GCAGGCGCGT
GAGTTCCTGC TGATCGACGT GGTTGTTCTT TCCATTCTCA TCTATGCGCT GCTCGGCAAA
CTGGCGGATC TGCTTGCCCG TTTCCTGGAG CGCGTGTTCC TGCAATGGCA TCCGGCCTAC
CAGACAGCGA GGTAA
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| Protein sequence | MQNSNLRPDA GHAPSLAPSL GLAWFRAGLS RLAGNSIGWA LPLLILIAWE ASSRAGLLQQ
NVLPAPSAVA EAFWRLTLSG ELPTNIGVST VRALAGFAIG GGIGFALGLL NGLSALSRGI
TDTTLQMVRN IPHLALIPLV ILWFGIDEEA KLFLVALGVF FPIYVNTLLG IQSVDPQLVE
MGRLYGMKPY RLFRKVILPG ALPAIFAGLR YGLGIMWLTL IVAETIAASS GLGYMAMQAR
EFLLIDVVVL SILIYALLGK LADLLARFLE RVFLQWHPAY QTAR
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