Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5440 |
Symbol | |
ID | 7381536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | + |
Start bp | 441497 |
End bp | 442336 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643649043 |
Product | hypothetical protein |
Protein accession | YP_002547280 |
Protein GI | 222106489 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0346] Lactoylglutathione lyase and related lyases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATTCA CAGCCGTTCA AGCAGGTGCG TACCTGCATC ACGTTGCATT CGAAAGCTCC AATCCTGAGC GTCTGGCGCG GTTCTATGCC GATGCCATGG ACATGAAGCT CGAAAAGGTT GGAGACGAGT GGATTTGTGA AGGGCCAAAG CGCCGCTTCA TCGCCGTTGC TGGAGCTGAC AAGAAGCTGG CTTATTCCGG ACTTGCTTGC CGCAATGCCG AAGGGCTTGC GCTTCTGCGG GCCCGGGTCG ATGCTGAAGG CATTGCGGTG CTGGCTAGCC CTTCGCCCTA TTTTGAAGAT GGTGCATTCG CGATTCGCGA TCCCGACGGA CGTATGGTGT GCTTCGGTGT AGCCAAGCCA GACAAGCCGG GCGCCAAGGG TATCCAGGGT CCAACGCAGC ATCTAACCTA TGCATCCGAG GATGTGGCCG CGTTTGTCGA CTTTTACGTC GGCAAGCTGG GTTTCCAGCT GACAGACCGC GTGCTGCATG AAGATGGCCG GCTTGCCACC GCCTTCACGA CCTCCAATCA CGAGCATCAC ACCATCGCCT GCTTCTATAC GCCGGGCCGC GTTGGCGTCG ATCACCATTC CTACGAGGCT GGGGAATGGA ACTACATCCG TGATTGGTGC GATCATCTGG CAACTCATGA TATCCAGCTC AGCTGGGGTC CCGGTCGCCA TGGTCCTGGC AACAATCTCT TCATTTTCAT CACTGATCCG GATGGCAATT GGATCGAGAT CTCGGCTGAA CTGGAAGTTA TCTACGATCG CGACACGATG GATTGGCCGC AGCATCCGCG CACGCTCAAT AAATGGGGCG AGGCGATTCT TCGCTCCTGA
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Protein sequence | MAFTAVQAGA YLHHVAFESS NPERLARFYA DAMDMKLEKV GDEWICEGPK RRFIAVAGAD KKLAYSGLAC RNAEGLALLR ARVDAEGIAV LASPSPYFED GAFAIRDPDG RMVCFGVAKP DKPGAKGIQG PTQHLTYASE DVAAFVDFYV GKLGFQLTDR VLHEDGRLAT AFTTSNHEHH TIACFYTPGR VGVDHHSYEA GEWNYIRDWC DHLATHDIQL SWGPGRHGPG NNLFIFITDP DGNWIEISAE LEVIYDRDTM DWPQHPRTLN KWGEAILRS
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