| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5439 |
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| Symbol | lldA |
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| ID | 7381535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 440012 |
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| End bp | 441151 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643649042 |
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| Product | L-lactate dehydrogenase |
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| Protein accession | YP_002547279 |
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| Protein GI | 222106488 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCATTT CGTCCTCGAC TGATTATCGC GAGGCGGCCC GCCGACGCCT GCCGCCCTTT
CTGTTTCATT ACATCGATGG CGGCGCCTAT AGCGAGCACA CGATGCGCCG CAATATTGAT
GATCTTGCCG ATCTGGCATT GCGTCAGCGG GTGCTGAAAA GCGTGGGCAC AGTTGATATT
TCCACGACGC TTTTCGATGA AGAGCTGGCT ATGCCGGTCG TTCTCGCGCC CGTTGGATTG
ACAGGCATGT ATGCAAGGCG CGGCGAAGTG CAGGCTGCGC GCGCAGCGGA AAAAAAAGGA
ATTCCACTGA CGCTTTCGAC GGTGTCCGTC TGCCCGATCG AGGAGGTGCA GGCGGCCAGC
AACCGTCCCA TCTGGTTCCA GCTCTACGTG CTGCGGGATC GCGGCTTCAT GAAGAATGCA
TTGGAGCGGG CCTGGGCGGC GGGTATCCGC AAACTGGTTT TCACGGTCGA CATGCCCGTA
CCTGGCGCCC GCTATCGTGA TGCCCATTCC GGCATGTCCG GCCCGAATGC TTCTCTGCGC
CGCATTATCC AGGCCGTCAT GCATCCGACA TGGGCTATCG ATGTCGGCCT GTTGGGAAAG
CCGCATGATC TTGGCAATGT TTCGGCCTAT CGCCAGCAGA AAACCAATCT GGCCGACTAT
GTCGGCTGGC TTGGTGAAAA TTTCGACCCC TCGATTGGTT GGAAGGATCT CGAATGGATC
AGGGATTTCT GGAAGGGACC GATGATCATC AAGGGCATTC TCGACCCGGA GGATGCAAAG
GATGCTGTGC GTTTCGGGGC CGATGGCATT ATCGTCTCGA ACCATGGCGG GCGCCAGCTG
GACGGCGTTC TGTCTTCCGC CCGCGCCTTG CCAGCCATTG CCGCTGCGGT CAAAGGTGAC
CTGACGATCC TTGCCGATTC CGGCATTCGC TCGGGTCTGG ATGTCGTGCG GATGATAGCG
CAGGGAGCCG ATGGCGTGTT GATCGGACGC GCTTTCGTCT ATGCATTGGC CGCTGCCGGG
CAGGCGGGCG TGGAAAATCT GCTCGATCTC TTCGCCAAGG AAATGCGGGT TGCCATGACA
CTGACCGGCG CGCGTTCTAT CGCCGAAATC TCACCCGATA GCCTGGTGCG TGGCCTCTGA
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| Protein sequence | MIISSSTDYR EAARRRLPPF LFHYIDGGAY SEHTMRRNID DLADLALRQR VLKSVGTVDI
STTLFDEELA MPVVLAPVGL TGMYARRGEV QAARAAEKKG IPLTLSTVSV CPIEEVQAAS
NRPIWFQLYV LRDRGFMKNA LERAWAAGIR KLVFTVDMPV PGARYRDAHS GMSGPNASLR
RIIQAVMHPT WAIDVGLLGK PHDLGNVSAY RQQKTNLADY VGWLGENFDP SIGWKDLEWI
RDFWKGPMII KGILDPEDAK DAVRFGADGI IVSNHGGRQL DGVLSSARAL PAIAAAVKGD
LTILADSGIR SGLDVVRMIA QGADGVLIGR AFVYALAAAG QAGVENLLDL FAKEMRVAMT
LTGARSIAEI SPDSLVRGL
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