| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5434 |
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| Symbol | xdhA |
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| ID | 7381530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 435519 |
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| End bp | 436004 |
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| Gene Length | 486 bp |
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| Protein Length | 161 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643649037 |
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| Product | xanthine dehydrogenase |
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| Protein accession | YP_002547274 |
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| Protein GI | 222106483 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.305547 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACCTGG GCTTCACACT GAATGGCCAG CGGGTCACTG TGGAGTGCCA GCCGGAGACG
CGGCTCACCG AAATTCTGCG TGACGAGCTG TATCTGAGCG CCACCAAGCT AGCCTGCGCC
ATTGGCCGCT GCGGCGCTTG TAGTGTGCTG TTGGATGGCA GGCTTGCCAA TGCTTGCCTA
CTGATGGCCT GGCAGATCGA CGGTGCCGAT ATTTTGACGG CGGAAGGGCT GGCCTCACAT
CCATTGGGAG ACGCGGTGCG CGAAGGGCTG GCGGAGGAAA ACGCTTTTCA ATGTGGCTAT
TGCGCGCCGG GCTTTTCGCT GGCGCTGGTG GCCTTGTTTG CCGACAACCC GCAGGCTGGG
GAAAAGGATA TTCGCGCTGG TCTGGAGGGC AATCTCTGCC GCTGCACCGG CTATCATTCG
ATCATCAGAG GGGCGTTGAA CGCCGCTTGC CGCATTCGCG CCGCACACGC CATTTCCGGA
GACTGA
|
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| Protein sequence | MNLGFTLNGQ RVTVECQPET RLTEILRDEL YLSATKLACA IGRCGACSVL LDGRLANACL
LMAWQIDGAD ILTAEGLASH PLGDAVREGL AEENAFQCGY CAPGFSLALV ALFADNPQAG
EKDIRAGLEG NLCRCTGYHS IIRGALNAAC RIRAAHAISG D
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