| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5393 |
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| Symbol | |
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| ID | 7381497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 394226 |
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| End bp | 395242 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643649005 |
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| Product | ABC transporter substrate binding protein (sulfate) |
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| Protein accession | YP_002547242 |
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| Protein GI | 222106451 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1613] ABC-type sulfate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00971] sulfate/thiosulfate-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0845321 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCGTT TTCGTACCGT GAAGATCATT GCCACGCTGG CGATAGCCGC AAGCCTCGCC
ATGCCCGCTG TTGCGGCCAA TGTGACATTG CTCAACGTCA GCTACGACCC GACGCGCGAG
CTGTACAAGG ATTTCAATCC GGCATTCGCC GCCTATTGGA AGCAAAAGAC CGGCGACAGC
GTTTCTGTGA GAATGTCGCA TGGCGGTTCG GGCGCCCAGG CCCGCTCGGT GATCGACGGT
CTTGAGGCCG ACGTGGTGAC GCTGGCATTG GAAGCGGATA TTTCCGCCAT CGCCGAAAAG
ACCGGCAAGA TCCCCGCCGA CTGGAAAACC AAACTGCCAA GCAGCAGTTC GCCCTATACA
TCCACCATCG TCTTCCTGGT GCGCAAGGGC AATCCGAAAG GCATCAAGGA CTGGGCCGAC
CTTACCAAGG ACGGGATTGA GGTGATCACC CCCAATCCGA AAACCTCGGG CGGTGCCCGC
TGGAACGTGC TGGCCGCTTG GGGCTGGGCG CTGAAAGCCA ACAATGGCGA TCAGCAGAAG
GCCAAGGAAT ACCTGAGCGC CCTGTTCAAG CATGTGCCAG TGCTGGATAC CGGTGCGCGC
GGCTCCACTA CCACCTTCGT GCAGCGTGGC ATCGGCGATG TTCTGCTTGC TTGGGAGAAC
GAAGCCTTCC TATCGATTGA TGAACTCGGC CCTGACAAAT TCGACATCAT CGTGCCGTCC
GTTTCGGTCA AGGCGGAGCC GCCGGTCGCC GTCGTCGAGG GCAATGCCAA AGCCCATGGG
ACAGAAGCGG TCGCCAAGGC CTATCTCGAT TATCTCTATT CCGACGCCGG ACAAAAGATC
GCTGCCAAGC ATTACTATCG CCCTGCAAAG CCTGAATTGG CCGATCCTGC CGACTTGAAG
CGGTTCCCGT CGGTTGATCT CGTCACCATC GAGGATTTCG GTGGCTGGGC AAAAGTGCAG
CCGCAATTCT TCGCTGATGG TGGCCTGTTC GACCAGATCT ACCAGCCCGG AAAGTAA
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| Protein sequence | MSRFRTVKII ATLAIAASLA MPAVAANVTL LNVSYDPTRE LYKDFNPAFA AYWKQKTGDS
VSVRMSHGGS GAQARSVIDG LEADVVTLAL EADISAIAEK TGKIPADWKT KLPSSSSPYT
STIVFLVRKG NPKGIKDWAD LTKDGIEVIT PNPKTSGGAR WNVLAAWGWA LKANNGDQQK
AKEYLSALFK HVPVLDTGAR GSTTTFVQRG IGDVLLAWEN EAFLSIDELG PDKFDIIVPS
VSVKAEPPVA VVEGNAKAHG TEAVAKAYLD YLYSDAGQKI AAKHYYRPAK PELADPADLK
RFPSVDLVTI EDFGGWAKVQ PQFFADGGLF DQIYQPGK
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