| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5390 |
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| Symbol | |
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| ID | 7381494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 391433 |
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| End bp | 392470 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643649002 |
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| Product | ABC transporter nucleotide binding/ATPase protein |
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| Protein accession | YP_002547239 |
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| Protein GI | 222106448 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1118] ABC-type sulfate/molybdate transport systems, ATPase component |
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| TIGRFAM ID | [TIGR00968] sulfate ABC transporter, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.695996 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACTGA ATATTCGCAA TATCCGCAAG GACTTCAACG CGACCGCCGC CCTCCACGAA
CTGTCGCTGG ACATCCGCTC CGGCGAGTTG ATCGCGCTTG TCGGCCCCTC CGGTTCGGGA
AAAACCACCT TGCTGCGGCT AATCGCCGGG CTTGAGCGGC CAAGTGCTGG CCAGATTTTC
TTCGGCGACG ACGATGCGTC GCGCAAGACC GTGCAGGAAC GGCAAGTCGG CTTCGTGTTC
CAGCACTATG CGCTGTTCAA GCATATGACC GTGCTGGAAA ATGTCGGCTT CGGCCTCACC
GTTCGACCAA AGTCGTCGCG TCCGCCCAAG GCGGAAATCC GCAAACGCGC CTTGGAACTG
CTCGATTTCG TGCAGCTGTC GGGCCTTGAA AAACGCTATC CGGCCCAGCT CTCCGGTGGT
CAGCGTCAGC GCGTCGCGTT GGCCCGCGCC ATGGCAATCG AGCCAAAGGT GCTGCTGCTG
GACGAGCCTT TCGGCGCTCT CGACGCCCAG GTCCGCAAGG ATTTGCGGCG CTGGCTGCGG
GAAATTCATG ATCGCACCGG CCATACCACC GTATTCGTCA CCCACGATCA GGAAGAGGCA
CTGGAACTTG CCGACCGCGT CGTGGTGATG AGCCAGGGCC GCATCGAGCA GGTCGGCACC
GCCGACGACG TCTATGACAA TCCGGCGGCC CCATTCGTTC ATCGCTTCAT CGGTGAATCC
TCGGCGCTGC CGGTGCGCAT CGAATCCGGC GAGATCTGGC TTGATGACCG GCCGACCGGG
TTGAAATCCG AAGGCAACGG CAATGCGACG CTGTTCTTCA GGCCGCAGGA AGTCGAGATT
GTCGATGGGT GTGGCGGCTG CTTTGCCGGA ACGGTGATCA GCAGCCGAAG ACTGTCGGGA
ACCCGCCGTC TGGAACTGGA GCTTGGCGGC GCACGGCATC TGGCGGAAAT CGACGTTCCC
GTCGATCATC CCGCCGCCAC CCGAACCGGG ATATCCTTCC GCCCCAAACG CTGGAAAGTC
TATCCGGCAA GCGCCTGA
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| Protein sequence | MELNIRNIRK DFNATAALHE LSLDIRSGEL IALVGPSGSG KTTLLRLIAG LERPSAGQIF
FGDDDASRKT VQERQVGFVF QHYALFKHMT VLENVGFGLT VRPKSSRPPK AEIRKRALEL
LDFVQLSGLE KRYPAQLSGG QRQRVALARA MAIEPKVLLL DEPFGALDAQ VRKDLRRWLR
EIHDRTGHTT VFVTHDQEEA LELADRVVVM SQGRIEQVGT ADDVYDNPAA PFVHRFIGES
SALPVRIESG EIWLDDRPTG LKSEGNGNAT LFFRPQEVEI VDGCGGCFAG TVISSRRLSG
TRRLELELGG ARHLAEIDVP VDHPAATRTG ISFRPKRWKV YPASA
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