| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5375 |
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| Symbol | |
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| ID | 7380728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 375466 |
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| End bp | 376494 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643648989 |
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| Product | ABC transporter membrane spanning protein (dipeptide) |
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| Protein accession | YP_002547226 |
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| Protein GI | 222106435 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.296899 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTTGC ATGTTGTCGA GCAGATCGTG AGGCGGGTGT TTTCCGTGGT CATGGTGCTG
TTCGTGCTGT CTTTGATGAT TTTTGCGCTG GCCCGCGTGG TACCCGGCGA TCCGGCCCGC
ATGGCGCTGG GGCCGTCGGC ATCGCAGGAA CAGGTCACGG CGCTGGCCCG TGAAATGGGA
CTCGATCAGC CTGTCCTTGT GCAATATGGC CGCTACATCA CGAATGCCCT GCAAGGCGAT
CTTGGCCAAT CGCTGTCGTC GCATCGTCCC GTCATTCAGG ATGTTGTTGA ATTTCTCCCC
GCCACGCTGG AGCTTGTGGT GGTGACGGTC ATTCTCGATC TGCTGATTGC CATTCCCCTT
GGCGTCATCA CCGCACGTCA CCGAAACACC TGGATCGATA ATATCGGACG ACTGTTTTCC
ATGGTCGGCG TCACGGTGCC GTCGTTTCTG TTTGCCATTG GTCTGCAATT GTTTGCGGCG
AATTTTCTGC CGGGCTGGCC TTTGTTGGGG CAGGTGAATT TCGATCTTCA CGCCCCCGCC
GGGCCAACCG GCTTTCTGTT GGTTGATAGT TTGATCCATG GCCGCGCCGA TGTGTTTGTG
GATGCCCTGC AACATCTGAT CTTTCCGGCA TTGGCACTGG CCATGGCAGG CATTGGCCAG
ATCACCCGCA TCATGCGCTC GGCAATGATT GAAAATCAGC GCAAGGACCA TGTTCTAACA
CTGCTCAGTT TTGGCGTGCC GGATTATGTT GTGACCTTTC GCTACCTGCT CAAGTTGTCG
TCTGTAGCAC CGCTGACCAT CATGGGGCTG GAATTTGCCT CGCTGATTGG CAATGCCTTT
GTGGTGGAAA TGGTGTTTGG CTGGGGTGGT TTTGCGTCTT ACGGTCTCAA CGCCATCCTG
CAAAAAGACC TGAACGCCCT GATGGCTGTG GTGCTGATTT CCGGCCTGTT TTTCATTCTC
GCCAATCTTG TCATCGATCT GATTGTCAGC CTGATTGATC CGCGCCTGCG TTTTCGGGGA
GGCCAATGA
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| Protein sequence | MILHVVEQIV RRVFSVVMVL FVLSLMIFAL ARVVPGDPAR MALGPSASQE QVTALAREMG
LDQPVLVQYG RYITNALQGD LGQSLSSHRP VIQDVVEFLP ATLELVVVTV ILDLLIAIPL
GVITARHRNT WIDNIGRLFS MVGVTVPSFL FAIGLQLFAA NFLPGWPLLG QVNFDLHAPA
GPTGFLLVDS LIHGRADVFV DALQHLIFPA LALAMAGIGQ ITRIMRSAMI ENQRKDHVLT
LLSFGVPDYV VTFRYLLKLS SVAPLTIMGL EFASLIGNAF VVEMVFGWGG FASYGLNAIL
QKDLNALMAV VLISGLFFIL ANLVIDLIVS LIDPRLRFRG GQ
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